Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1305 288 2e-75 seq160 176 8e-42 seq810 149 1e-33 >seq1305 Length=8880 Score = 288 bits (318), Expect = 2e-75 Identities = 187/204 (92%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 6751 CACCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT-T 6693 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| |||||| ||||| |||||| |||||||||||||||||| Sbjct 6692 GAAAGGGTGAACAATCCTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGAC 6633 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 6632 ATCGAAGGATCAAAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCC 6573 Query 212 TGTGGTAACTTTTCTGGCACCTCT 235 |||||||||||||||| ||||||| Sbjct 6572 TGTGGTAACTTTTCTGACACCTCT 6549 >seq160 Length=132779 Score = 176 bits (194), Expect = 8e-42 Identities = 118/132 (89%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 104 AATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 ||| | |||||| ||||| |||||| |||||||||||||||||||||||||||||| Sbjct 84762 AATACTACGCTTTGTGAATTTTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCA 84821 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 |||||| ||||||||||||||||||||| |||||||||||||||||||| | |||||||| Sbjct 84822 AAAAGCCACGTCGCTATGAACGCTTGGCGGCCACAAGCCAGTTATCCCTTTAGTAACTTT 84881 Query 224 TCTGGCACCTCT 235 |||| ||||||| Sbjct 84882 TCTGACACCTCT 84893 >seq810 Length=30557 Score = 149 bits (164), Expect = 1e-33 Identities = 156/206 (76%), Gaps = 27/206 (13%) Strand=Plus/Plus Query 36 AGTAGGGTAAAACTAACCT------GTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||| |||||| | |||| |||||||||||||||||||| |||||| Sbjct 30153 AGTAGGGTAAAATTAACCTCACGAGGCCTCACTACGGTCTAAACCCAGCTCACATTCCCT 30212 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | |||||||||| || ||| || | ||| ||||| |||||||||||| Sbjct 30213 -TGAAAGGGTGAACAACCCTACGTTTTGTGCATTTGGCTTCACAATGATAGGAAGA---- 30267 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||||||| | ||||| |||||||||| ||||||||||||||||| Sbjct 30268 -----------TCAAAAAGCCA----GCTAT-AACGCTTGGCGGCCACAAGCCAGTTATC 30311 Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235 |||||||||||||||||| ||||||| Sbjct 30312 CCTGTGGTAACTTTTCTGACACCTCT 30337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854357305632