Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1305 439 8e-121 >seq1305 Length=8880 Score = 439 bits (486), Expect = 8e-121 Identities = 316/363 (87%), Gaps = 1/363 (0%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA 231 ||||| | | || || ||||||| | | |||| || ||||||| ||| | | || Sbjct 6122 GTTCCACCTAATCGAATAAGTAAGGCAGCAGTAAGAGTGGTGGTATCTCATTGGTGCTAT 6063 Query 232 AACG-GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 | |||||||| ||| || ||||||| | | | |||| | | |||||||||||| Sbjct 6062 TGCTAGCTCCCACCTATGCTGCACCTCTTATACCGCCTTACAATGCCAGACTAGAGTCAA 6003 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 6002 GCTCAACAGGGTCTTCTTTCCCCGCTAGTGTTTCCAAGCCCGTTCCCTTGGCTGTGGTTT 5943 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5942 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 5883 Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5882 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 5823 Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 5822 GCTTGCTTGAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCA 5763 Query 531 ACA 533 ||| Sbjct 5762 ACA 5760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635118289056