Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1305 342 2e-91 seq1490 244 3e-62 >seq1305 Length=8880 Score = 342 bits (378), Expect = 2e-91 Identities = 398/521 (76%), Gaps = 27/521 (5%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACCCAAAAGA---GCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||| || | ||| || | || ||| ||||| | ||||||||||| Sbjct 943 TCATTCCAATTACA-GAACTAAATGATTAGTTCTATATTGTTATTTTTCGTCACTACCTC 885 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | || | | || |||||||||| ||||||||||||||||||| ||||| ||||| ||| Sbjct 884 CTCGAGCTGAGAATGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTAGTAGCAATTT 825 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||| ||||||||||||||||||||||||| |||||||||||||||| | |||||||||| Sbjct 824 CTCGGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTAGCAACCATGGTAG 765 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||| |||||||| ||||||||||||||||| ||||||| || | |||||||| | Sbjct 764 TCCTCTATACTACCATC-AAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGCCGGCAC 706 Query 242 -AAGGCCATGCGATTCGTTAAGTTATTATGAAT--CACC-----AAGGAGCCCCGAAGGG 293 |||||||| |||| | ||||||| || | |||| | | ||||||||| Sbjct 705 AAAGGCCATACGATCAGCAAAGTTATCTAGAGTTCCACCGATATGAACATCCCCGAAGG- 647 Query 294 CGTTGGTT-TTTTATCTAATAAATACACCCCTTCCG-AAGTCGGG-----GT-TTTTA-G 344 |||| || ||| |||||||| | ||| ||| | |||| || || || | Sbjct 646 -GTTGATTGGTTTGTCTAATAACTGCACAAGAACCGTTTGACGGGTACTTGTATTATATG 588 Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG-GTACTATCAAATAAAC 403 ||||||||||||||||| || |||| |||||||| ||| | | || ||| || ||| Sbjct 587 CATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTACTGGGAATATGATCTAAGAAAT 528 Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 | | ||| | || |||||| || || |||||||| ||| | | || ||||||||||| Sbjct 527 TACAGCTGTTATACTGAGCCTTTTGCGGTTTCACTTTAT-TTTAGTTTGTACTTAGACAT 469 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||| ||||||||| ||| ||| | |||||| || Sbjct 468 GCATGGCTTAACCTTTGAGACGAGCGTAT-ATTACTGGTAG 429 >seq1490 Length=5491 Score = 244 bits (270), Expect = 3e-62 Identities = 305/404 (75%), Gaps = 23/404 (6%) Strand=Plus/Plus Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||| |||||| |||||||||||||||||| |||||||||||||||||| || |||| Sbjct 1478 TTTCTCGGGCTCCATCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACAATGG 1537 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 ||| || |||| |||||||| ||||| ||||||||||| ||||||| || | ||||||| Sbjct 1538 TAGTCCTCTATACTACCATC-AAAGTGGATAGGGCAGACATTTGAAAGATCTGTCGCCGG 1596 Query 239 CTC-AAGGCCATGCGATTCGTTAAGTTATTATGAAT--CACC-----AAGGAGCCCCGAA 290 | | |||||||| |||| | ||||||| || | |||| | | ||||||| Sbjct 1597 CACAAAGGCCATACGATCAGCAAAGTTATCTAGAGTTCCACCGATATGAACATCCCCGAA 1656 Query 291 GGGCGTTGGTT-TTTTATCTAATAAATACACCCCTTCCG-AAGTCGGG-----GT-TTTT 342 || |||| || ||| |||||||| | ||| ||| | |||| || || | Sbjct 1657 GG--GTTGATTGGTTTGTCTAATAACTGCACAAGAACCGTTTGACGGGTACTTGTATTAT 1714 Query 343 A-GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG-GTACTATCAAATA 400 | |||||||||||||||||| || |||| |||||||| ||| | | || ||| || | Sbjct 1715 ATGCATGTATTAGCTCTAGATTTTCCACAGTTATCCAAGTACTGGGAATATGATCTAAGA 1774 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 || | | ||| | || |||||| || || |||||||| ||| | | || |||||||| Sbjct 1775 AATTACAGCTGTTATACTGAGCCTTTTGCGGTTTCACTTTAT-TTTAGTTTGTACTTAGA 1833 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||| ||||||||| ||| ||| | |||||| || Sbjct 1834 CATGCATGGCTTAACCTTTGAGACGAGCGTAT-ATTACTGGTAG 1876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510324525312