Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1833 131 7e-28 seq74 109 2e-21 seq12261 102 3e-19 >seq1833 Length=919386 Score = 131 bits (144), Expect = 7e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||| | ||| ||| |||| |||||| |||| ||| Sbjct 782946 GGACCCGAAAGATGGTGAACTATGCCCGGCCAGGACGAAACCAGGGGAAACCCTGGCGGA 783005 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||||| ||||||||||||||||| | ||||||||||||||| Sbjct 783006 GGTCCGCAGCGGTTCTGACGTGCAAATCGATCGTCCGAGCTGGGTATAGGGGCGA 783060 >seq74 Length=7515793 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||||| |||||||||||||||||| | ||| ||| ||| ||||| | ||| || Sbjct 6078377 GGACCCGGAAGATGGTGAACTATGCCCGGCCAGGACGAAAGCAGGGGAAAGTTTGGCGGT 6078318 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||||||| |||||||||||||| || | ||||||||||||||| Sbjct 6078317 GGTCCGCAGCGGTTCTGACGTGCAAATCGATCATCCGAGCTGGGTATAGGGGCGA 6078263 >seq12261 Length=536 Score = 102 bits (112), Expect = 3e-19 Identities = 109/143 (76%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| || | |||| | |||||| |||| || |||||| | | ||||| |||||| Sbjct 389 GAGTCGGGTCGCTTGGTAGTGCAGCCCTAAGAGGT-GGTAAACTCCATCTAAGGCTAAAC 331 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | | ||||||||||| | ||||||| || ||||| ||||||| ||| || | Sbjct 330 ATCGCCGCGAGACCGATAGAGGACAAGTACCGTTCGGGAAAGTTGAAAAGGACTCTGCAG 271 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 ||||||||||| || |||||||| Sbjct 270 AGAGAGTTAAAGAGTACGTGAAA 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079576341050