Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq19749 161 2e-37 seq74 152 8e-35 >seq19749 Length=5098 Score = 161 bits (178), Expect = 2e-37 Identities = 103/112 (92%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3002 TAGCAGGACGGGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 2943 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||| ||||||| || |||||||||| Sbjct 2942 GAACGGCCATGCACCACCACCCACCGAATCGAGAAAGAACTCTCAATCTGTC 2891 Score = 82.4 bits (90), Expect = 1e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 12 TCCGTC-AGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 |||||| | |||||| ||||||| |||||| |||||||||||||||||||||||||||| Sbjct 3364 TCCGTCCATTGTAGCACGCGTGCCGCCCAGGACATCTAAGGGCATCACAGACCTGTTATC 3305 Query 71 GC 72 || Sbjct 3304 GC 3303 >seq74 Length=7515793 Score = 152 bits (168), Expect = 8e-35 Identities = 101/112 (90%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2909553 TAGCAGGACGGGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 2909494 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||| ||||| ||||||| || |||||||||| Sbjct 2909493 GAACGGCCATGCATTACCACCCACCGAATCGAGAAAGAACTCTCAATCTGTC 2909442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796647542031