Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq19749 123 5e-26 >seq19749 Length=5098 Score = 123 bits (136), Expect = 5e-26 Identities = 188/262 (72%), Gaps = 8/262 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGCTCA---AGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| || ||||| || | | || ||||||||||| Sbjct 3259 GCTTCTTAGAGGGACAAACGGCGCAGTCAGCCGTGCGA--TACGGAGCGATAACAGGTCT 3316 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT-GACAGAGCCAACGAGTTC 186 ||||||||||||||||| |||||| ||||||| |||||| | ||| || || || |||| Sbjct 3317 GTGATGCCCTTAGATGTCCTGGGCGGCACGCGTGCTACAATGGACGGA-TCAGCGTGTTC 3375 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 | ||| | || || ||||| | | || | | |||| |||| | | Sbjct 3376 -TACCCTACGTCGAGAGACACCGGTAACCCCCTGAATCCCGTCCGTGGAAGGGACCGGGG 3434 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 |||||||| || | | |||||||||| || |||| |||| ||||| | | |||| Sbjct 3435 CTTGCAATTGTTCCCCGCGAACGAGGAATTCCCAGTAGTCGCGAGTCATAACCTCGCGGC 3494 Query 307 GATTACGTCCCTGCCCTTTGTA 328 ||||| |||||||||||||||| Sbjct 3495 GATTAAGTCCCTGCCCTTTGTA 3516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947012918528