Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2983 399 7e-109 seq123 134 5e-29 seq2971 107 6e-21 seq3555 89.7 2e-15 seq3477 82.4 2e-13 seq2966 82.4 2e-13 seq356 80.6 9e-13 seq10083 75.2 4e-11 >seq2983 Length=3065 Score = 399 bits (442), Expect = 7e-109 Identities = 268/298 (90%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||| |||| || ||| ||| |||||||||||||||||||| Sbjct 642 CTCCCACTTATGCTACGCCTCGCATGTCTCCGTACAGCACCGGACTAGAGTCAAGCTCAA 701 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCG--CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||| Sbjct 702 CAGGGTCTTCTTTCCCCGCTGATAGTGTCCCAAGCCCGTTCCCTTGGCTGGGGTTTCGCT 761 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||| || Sbjct 762 GGATAGTAGATAGGGACAGAGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATTGGA 821 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct 822 TGACGAGGCATTTGGCTACCTTAAAAGAGTCATAGTTACTCCTGCCGTTTACCCGCGCTT 881 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 | |||||| ||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct 882 GCTTGAATCTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCTAC 939 Score = 111 bits (122), Expect = 5e-22 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 ||||||| || ||| |||| || ||| |||| | |||||||||||||||||||| | Sbjct 227 TTTGCTCGACTCGAGGTTTCCGTCCTCGGTGAGCCGGCCTTAGGACACCTGCGTTATCCT 286 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCG 127 || |||||||| ||||||||| |||||||||| |||| | |||| || ||||||||| Sbjct 287 TTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCGCTGTCCTCGGCCCGGATCG 345 >seq123 Length=1822951 Score = 134 bits (148), Expect = 5e-29 Identities = 97/112 (87%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 || |||| |||||| |||||||||||| |||| ||||| ||||||| |||| |||| || Sbjct 1571972 GTTGATACGGACAGAGGGAATCTCGTTGATCCGTTCATAGGCGTCACCAATTGGATGCCG 1571913 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 ||||||||||||||| || | ||||||||||||||| |||||||||||||| Sbjct 1571912 AGGCATTTGGCTACCCGAAAATAGTCATAGTTACTCCTGCCGTTTACCCGCG 1571861 Score = 104 bits (114), Expect = 8e-20 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 || |||| ||||||| | |||||||||| |||| ||| |||||||| | ||| || | | Sbjct 1475455 AGGAGATGGGGACAGAGAGAATCTCGTTGATCCTTTCGTGCGCGTCGCCAATGTGAGGCC 1475514 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 ||||||||||| |||| || | || || |||||||| |||||| ||||||||| Sbjct 1475515 GAGGCATTTGGATACCCGAAAAAAGCCAAAGTTACTCTTGCCGTTCACCCGCGCT 1475569 Score = 100 bits (110), Expect = 9e-19 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || || |||| ||||||| ||||||||||| |||| ||| |||||||| ||||| || Sbjct 1475900 GAGAGGAGATGGGGACAGAGGGAATCTCGTCGATCCGTTCGTGCGCGTCGCTAATATGAA 1475959 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 | |||||||||||| |||| || | || || ||||||||| |||||| Sbjct 1475960 GCCGAGGCATTTGGATACCCGAAAAAAGCCAAAGTTACTCCTGCCGTT 1476007 Score = 95.1 bits (104), Expect = 4e-17 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||| ||||||| ||||||||||| | || ||| | |||||| | | || || | ||| Sbjct 1475612 AGATGGGGACAGAGGGAATCTCGTCGACCCGTTCGTACGCGTCGCCACTTTGAAGCCGAC 1475671 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||| |||| || | || || ||||||||| |||||| ||||||||| Sbjct 1475672 GCATTTGGGTACCCAAAAAAAGCCAAAGTTACTCCTGCCGTTCACCCGCGCT 1475723 Score = 95.1 bits (104), Expect = 4e-17 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||| ||||||| ||||||||||| | || ||| | |||||| | | || || | ||| Sbjct 1475760 AGATGGGGACAGAGGGAATCTCGTCGACCCGTTCGTACGCGTCGCCACTTTGAAGCCGAC 1475819 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||| |||| || | || || ||||||||| |||||| ||||||||| Sbjct 1475820 GCATTTGGGTACCCAAAAAAAGCCAAAGTTACTCCTGCCGTTCACCCGCGCT 1475871 >seq2971 Length=93706 Score = 107 bits (118), Expect = 6e-21 Identities = 91/112 (81%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||| ||||||| ||||||||||| |||| ||| |||||||| | ||| || | |||| Sbjct 93403 AGATGGGGACAGAGGGAATCTCGTCGATCCGTTCGTGCGCGTCGCCAATATGAAGCCGAG 93344 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||| |||| || | || || ||||||||| |||||| ||||||||| Sbjct 93343 GCATTTGGATACCCGAAAAAAGCCAAAGTTACTCCTGCCGTTCACCCGCGCT 93292 >seq3555 Length=1305 Score = 89.7 bits (98), Expect = 2e-15 Identities = 52/54 (96%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 |||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 1251 TAGTAGATAGGGACAGAGGGAATCTCGTTGATCCATTCATGCGCGTCACTAATT 1304 >seq3477 Length=1453330 Score = 82.4 bits (90), Expect = 2e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 470 CGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTC 529 || ||| |||||| ||||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct 124397 CGATTGCTTGAATCTCTTCACGTTGACATTCAAAGCACTGGGCAGAAATCACATCGCGTC 124338 Query 530 AAC 532 || Sbjct 124337 TAC 124335 >seq2966 Length=1659 Score = 82.4 bits (90), Expect = 2e-13 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 ||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct 8 CCAAGCCCGTTCCCTTGGCTGGGGTTTCGCTGGATAGTAGATAGGGACAG 57 >seq356 Length=1587136 Score = 80.6 bits (88), Expect = 9e-13 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 |||| ||||||| |||||||||||||||||||||||||||||||| ||||| || Sbjct 624016 GAATCTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCTAC 623963 >seq10083 Length=1802 Score = 75.2 bits (82), Expect = 4e-11 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 ||||||||||||||||| || | ||||||||||||||| |||||||||||||| Sbjct 1801 CGAGGCATTTGGCTACCCGAAAATAGTCATAGTTACTCCTGCCGTTTACCCGCG 1748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634877031648