Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10062 143 2e-29 seq16 82.4 6e-11 >seq10062 Length=763049 Score = 143 bits (158), Expect = 2e-29 Identities = 144/187 (77%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 61190 AACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGA 61249 ||||||| ||| ||||| | || || ||||| || ||||| |||||||| ||||| | Sbjct 236101 AACATTTTATTTCGCATGTACTTGCATTTTTTGCTGCCTCGGATGGTATCGTTAATGAAA 236042 Query 61250 ATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCT 61309 | | | ||| | ||| || ||||| ||||| |||| || ||||||||||| |||| Sbjct 236041 ACCTGGTAGAAAGATTCAGTCAAGAGGTTCAAGTAACGGAAGCACGTTGTTTCTATGGCT 235982 Query 61310 TCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACA 61369 |||| || || ||||||||||||||||| || ||||| ||| | |||||||| || |||| Sbjct 235981 TCCAAATAGCAATGGAGAATGTCCACTCTGAAATGTATAGTTTACTCATCGACACTTACA 235922 Query 61370 TCAGGGA 61376 | || || Sbjct 235921 TTAGAGA 235915 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 |||||||||||||| || || || || || ||| ||||||| || |||||| | || Sbjct 235223 TTGTTCAATGCCATTGAAACAATGCCTTGTGTAAAGAGGAAAGCAGACTGGGCCATGAAA 235164 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 |||||| | | | | | || | |||||| || | |||||||| | || || Sbjct 235163 TGGATCGCTGATGATGCATCAAGCTTCGCCGAACGAGTGATTGCATTTGCAGCTGTGGAA 235104 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || ||| ||| || ||| |||| || ||| |||||||| | || | ||| Sbjct 235103 GGAATCTTCTTCTCTGGCAGTTTCGCCTCAATTTTCTGGCTGAAGAAAAGGGGTTTGATG 235044 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 || || || || ||||||||||| | || || || || || Sbjct 235043 CCTGGCCTCACTTTCAGCAATGAACTAATCTCTCGAGATGA 235003 >seq16 Length=5839711 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 67076 TTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATGTAGAGTCATCATACTG 67135 ||||||| ||||| ||||| || |||||| ||||||||||||| |||| |||| || Sbjct 3541405 TTGGAGACAGCGATTCGGGCAGCTAGGACAGCATAATCGGGATGGCGAGTTGTCATCGTG 3541464 Query 67136 GCGGCAGTTTCAGCGGCCAAGGTATCAAGTTCAGCGGTAGTCACACCAGGATACAGGCCA 67195 || || ||||| ||||||| |||| | || | || || || ||||| || || ||| Sbjct 3541465 GCTGCTGTTTCCGCGGCCAGATTATCCAACTCCACAGTCGTAACGCCAGGGTAAAGTCCA 3541524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397472299294640