Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq373 152 4e-35 seq1601 75.2 8e-12 >seq373 Length=1274844 Score = 152 bits (168), Expect = 4e-35 Identities = 109/124 (88%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| ||||||||||||||||||||||||| ||||||| || || Sbjct 21330 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACTCCGTGGTAACCGGCC 21389 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 || || |||||| ||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 21390 TCACG-AGGTTAGCCTAGCTACTTCTGGAGCAACCCACTCCCATGGTGTGACGGGCGGTG 21448 Query 135 TGTA 138 |||| Sbjct 21449 TGTA 21452 >seq1601 Length=193913 Score = 75.2 bits (82), Expect = 8e-12 Identities = 89/121 (74%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||| ||| | | | | | |||| |||| Sbjct 146652 TACGGCTACCTTGTTACGACTTCACCCCAATCACCAGTTTTACCTTCGGCGGCGCACTCC 146593 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||| |||||| ||||| | | || ||| |||||||||||||||||||||| Sbjct 146592 TTGCGGTTATGCTACCGACTTCGGGTCCCCCCGGCTCTCATGGTGTGACGGGCGGTGTGT 146533 Query 138 A 138 | Sbjct 146532 A 146532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345519673920