Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq98 201 2e-49 seq2720 192 9e-47 seq697 179 6e-43 seq1910 150 3e-34 seq1042 120 5e-25 >seq98 Length=1778995 Score = 201 bits (222), Expect = 2e-49 Identities = 178/218 (82%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||||||||| |||||||||| ||||| |||||| | Sbjct 67463 GTACAAAGGGCAGGGACGTAATCACCGCGAGCTT-ATGACTCGCGATTACTGGGAATT-C 67406 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| | ||||| | | |||| | || Sbjct 67405 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 67346 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||| || || | ||| || ||| | | ||||||||||||||||||| Sbjct 67345 ACCCGGCCCTTTCGGGCAGGGAG---GACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 67289 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||||||||||||| |||||||||||||||||||| Sbjct 67288 GCCCAGAACATCTAAGGACATCACAGACCTGTTATTGC 67251 >seq2720 Length=46158 Score = 192 bits (212), Expect = 9e-47 Identities = 184/228 (81%), Gaps = 6/228 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||| ||||| |||||||| | ||||||||||||| | Sbjct 20369 GTACAAAGGGCAGGGACGTAATCAACGTGAGCT-GATGACTCACACTTACTAGGAATT-C 20426 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| ||| || ||||||||| | ||||| |||||| | | |||||| | || Sbjct 20427 CTCGTTCAAGGGAAATAATTGCAATTCCCGATCCCGATCACGGAGGATTTTCAAGGGGTT 20486 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||| ||||| | ||| | || | || ||| | | ||||||||||||||||| Sbjct 20487 ACCAATCCCTTTCGGCAATGGTTACAG-CACGCTGATTCCTCCAGTGTAGCGCGCGTGCA 20545 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||| | |||||||||||||||||||||||||||||| ||| |||||| Sbjct 20546 GCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC-AACTTC 20591 >seq697 Length=1225817 Score = 179 bits (198), Expect = 6e-43 Identities = 179/226 (79%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| | |||||| |||||||||| ||||| | |||| | Sbjct 814895 GTACAAAGGGCAGGGACGTAATCACCATGAGCTT-ATGACTCGCGATTACTGGCAATT-C 814952 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | ||||||||||| | ||||| | ||| | | | |||| || || Sbjct 814953 CTCATTCATGGGGAACAATTGCAAGCCCCAATCCCTAGCACAAAGGAGGTTCAGCGAGTT 815012 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 | |||| ||| |||| || || | ||| |||||| | | |||||||||||| | |||| Sbjct 815013 AGCCGGCCCTTTCGGGCAGGGAG---GACACGTTGATTCCTTCAGTGTAGCGCACATGCG 815069 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 815070 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 815114 >seq1910 Length=176071 Score = 150 bits (166), Expect = 3e-34 Identities = 172/224 (77%), Gaps = 8/224 (4%) Strand=Plus/Minus Query 4 CAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTC 63 |||||||||||||| || ||| | |||||| |||||||||| ||| | |||||| ||| Sbjct 102696 CAAAGGGCAGGGACATAATCACCATGAGCTT-ATGACTCGCGATTATTGGGAATT-CCTT 102639 Query 64 GTTGAAGACCAACAATTGCAATGATCTA-TCCCCATCACGATGAA-ATTTCAAAGATTAC 121 | | | | |||||| |||| | | |||| | ||||| | | |||| || |||| Sbjct 102638 GCTCATGGGGAACAATCGCAAGCCCCCAATCCCTAGCACGAAGGAGATTTAGCAGGTTAC 102579 Query 122 CCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGC 181 || | ||| |||| || || | ||| | ||| | | |||||||||||| |||||||| Sbjct 102578 CCAGCCCTTTCGGGCAGGGAG---GACATGCTGATTCCTTCAGTGTAGCGCACGTGCGGC 102522 Query 182 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||| ||||||||||||||||||||||| ||||| || Sbjct 102521 CCAGAACATCTGAGGGCATCACAGACCTGTTATTG-CTCAATCT 102479 >seq1042 Length=645749 Score = 120 bits (132), Expect = 5e-25 Identities = 118/149 (79%), Gaps = 5/149 (3%) Strand=Plus/Minus Query 78 ATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCC 136 ||||||| | ||||| | ||||| | | |||| | |||||||| ||| |||| | Sbjct 486816 ATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTTACCCGGCCCTTTCGGGC 486757 Query 137 AAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGG 196 | || | ||| || ||| | | ||||||||||||||||||| |||||||||||||||| Sbjct 486756 AGGGAG---GACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGTCCCAGAACATCTAAGG 486700 Query 197 GCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||||||||||| ||||| || Sbjct 486699 GCATCACAGACCTGTTATTG-CTCAATCT 486672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751819390280