Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq373 140 3e-31 >seq373 Length=1274844 Score = 140 bits (154), Expect = 3e-31 Identities = 145/188 (77%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 8 AAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA--A 65 ||| |||||||||||||||||||||| |||||||| ||||| ||| ||||| | | | Sbjct 19077 AAGTTTAGAAGCTTTTCTTGGAAGCAGGGCATCAATCACTTTC-CATTTAAAATAAATGA 19135 Query 66 CTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACCT 125 |||||||||| || | | || |||||||||||||||||| | ||||| ||| Sbjct 19136 ATCGTCATCAGTTCTCAGTAATAATCTCCCGGATTTACCTAAGAAATCTACCTACAGCCT 19195 Query 126 TAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATTAAC 185 | | |||||||||||||||| ||| |||||||||||||||||||||| | | | Sbjct 19196 TTCAAGTGGACAACCAACGCCACTCTGATTTAGCCTTCTCCGTCCCTCCATCACTGTTAT 19255 Query 186 CAGAAGTA 193 ||||||| Sbjct 19256 TAGAAGTA 19263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518275494576