Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq373 203 3e-50 seq2029 181 1e-43 seq385 114 1e-23 seq9935 100 3e-19 seq6689 100 3e-19 seq1690 96.9 3e-18 seq3885 91.5 1e-16 seq3213 89.7 5e-16 seq179 86.0 6e-15 seq1879 77.0 3e-12 seq3099 75.2 1e-11 seq1971 75.2 1e-11 seq9033 73.4 4e-11 seq3611 73.4 4e-11 seq1885 73.4 4e-11 >seq373 Length=1274844 Score = 203 bits (224), Expect = 3e-50 Identities = 118/122 (97%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 37 AGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCT 96 |||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 18924 AGCTGAAGCCAGTCGAAGATACCAGGCCGCTGCAACTGTTTATTAAAAACACAGCACTCT 18865 Query 97 GCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18864 GCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGA 18805 Query 157 TG 158 || Sbjct 18804 TG 18803 >seq2029 Length=231691 Score = 181 bits (200), Expect = 1e-43 Identities = 102/103 (99%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 20 GAGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTAT 79 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 190 GAAGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTAT 249 Query 80 TAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGG 122 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 250 TAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGG 292 >seq385 Length=1145925 Score = 114 bits (126), Expect = 1e-23 Identities = 81/93 (87%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| |||||||||||| |||||||||| |||||||||| |||||| |||||||| Sbjct 506458 AGGCCCAGGCGACTGTTTATCAAAAACACAGGACTCTGCAAAATCGAAAGATGACGTATA 506517 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| |||| |||||||||||| |||||||||| Sbjct 506518 GGGTCTGACACCTGCCCGGTGCTGGAAGGTTAA 506550 >seq9935 Length=12840 Score = 100 bits (110), Expect = 3e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| |||||||||| |||||| || |||||| |||||||| Sbjct 3407 AGGCCCAGGCGACTGTTTAGCAAAAACACAGGTCTCTGCTAAATCGAAAGATGACGTATA 3348 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||| ||||||||||||||||||||||| Sbjct 3347 GGGGCTGACACCTGCCCGGTGCCGGAAGGTTAA 3315 >seq6689 Length=8825 Score = 100 bits (110), Expect = 3e-19 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||| || ||||||||| || ||| || |||||||| ||| Sbjct 1664 GCGACTGTTTACTAAAAACATAGGTCTCTGCAAAGTCGTAAGACGAAGTATAGGGACTGA 1605 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||||||||||||| Sbjct 1604 CGCCTGCCCGGTGCCGGAAGGTTAA 1580 >seq1690 Length=1574822 Score = 96.9 bits (106), Expect = 3e-18 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| |||||||||| ||||||||| || ||| || ||||| Sbjct 1437047 AGGCCCAAGCGACTGTTTACCAAAAACACAGGTCTCTGCAAAATCGTAAGATGATGTATA 1436988 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| |||||||||||| ||||||||||||||| Sbjct 1436987 GGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAA 1436955 >seq3885 Length=21154 Score = 91.5 bits (100), Expect = 1e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| ||||||| || || |||||| |||||| |||||||| || ||| Sbjct 6116 GCGACTGTTTATCAAAAACATAGGGCTTTGCAAATTCGAAAGAAGACGTATAAGGCCTGA 6175 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 6176 CACCTGCCCGGTGCTGGAAGGTTAA 6200 >seq3213 Length=2170589 Score = 89.7 bits (98), Expect = 5e-16 Identities = 76/93 (82%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 61 GGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA--AAGTGGACGTAT 118 |||| |||||||||||| |||||||||| |||||| || ||| ||| || |||| Sbjct 606744 GGCCCATGCGACTGTTTACCAAAAACACAGGTCTCTGCTAAGTCGATCAAGACGATGTAT 606803 Query 119 AGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTA 151 |||| |||||||||||||||| |||||||||| Sbjct 606804 AGGGGCTGACGCCTGCCCGGTGTCGGAAGGTTA 606836 >seq179 Length=2312354 Score = 86.0 bits (94), Expect = 6e-15 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| ||||||||| || |||||| ||||| || ||||| || ||| Sbjct 505706 GCGACTGTTTATCAAAAACACATGGCTTTGCAAAATTGAAAGATGAAGTATAAGGCCTGA 505647 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | ||||||||||||||||||||||| Sbjct 505646 CACCTGCCCGGTGCCGGAAGGTTAA 505622 >seq1879 Length=185695 Score = 77.0 bits (84), Expect = 3e-12 Identities = 68/85 (80%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||| || |||||| ||||| || ||||| || ||| Sbjct 50036 GCGACTGTTTAGCAAAAACACATGGCTTTGCAAAATTGAAAGATGAAGTATAAGGCCTGA 50095 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 50096 CACCTGCCCGGTGCTGGAAGGTTAA 50120 >seq3099 Length=1637421 Score = 75.2 bits (82), Expect = 1e-11 Identities = 83/111 (75%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 42 ATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAA 101 ||| |||||| ||| | ||| | || |||||||| ||||||||| || |||||| Sbjct 410562 ATGTCGGTCGCAGAGAATAGGTCAAGGCAACTGTTTAACAAAAACACATGGCTATGCAAA 410621 Query 102 CACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| || ||||| || |||| |||||||||||| |||||||||| Sbjct 410622 TTAGAAATAAGAAGTATATAGTCTGACACCTGCCCGGTGCTGGAAGGTTAA 410672 >seq1971 Length=148721 Score = 75.2 bits (82), Expect = 1e-11 Identities = 80/106 (75%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| ||| | ||| | |||||||||||| ||||||||| || |||||| || Sbjct 102963 GGTCGCAGAGAATAGGTCCAGGCGACTGTTTATCAAAAACACATGGCTATGCAAAATAGA 102904 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || || ||||| | |||| |||||||||||| |||||||||| Sbjct 102903 AATATGAGGTATATAGCCTGACACCTGCCCGGTGCTGGAAGGTTAA 102858 >seq9033 Length=91990 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || |||||||| |||||||||| || |||||| ||||| ||||||| | ||| Sbjct 78341 GCAACTGTTTAACAAAAACACAGGGCTGTGCAAAATTGAAAGATCACGTATACAGCCTGA 78400 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 78401 CACCTGCCCGGTGCTGGAAGGTTAA 78425 >seq3611 Length=178444 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || |||||||| |||||||||| || |||||| ||||| ||||||| | ||| Sbjct 48390 GCAACTGTTTAACAAAAACACAGGGCTGTGCAAAATTGAAAGATCACGTATACAGCCTGA 48449 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 48450 CACCTGCCCGGTGCTGGAAGGTTAA 48474 >seq1885 Length=148911 Score = 73.4 bits (80), Expect = 4e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 || ||||||||| ||||||||| || |||||| |||| || ||||| || ||| Sbjct 16323 GCAACTGTTTATCAAAAACACATGGCTGTGCAAATTAGAAATAAGAAGTATACAGTCTGA 16382 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 16383 CACCTGCCCGGTGCTGGAAGGTTAA 16407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476685485752