Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq95 104 3e-20 >seq95 Length=1800565 Score = 104 bits (114), Expect = 3e-20 Identities = 139/192 (72%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 30 ACTTCTTCGCGCGCTTTTTTCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTG 89 ||||||| |||||||||| | || | || || || |||||||| | ||| || || Sbjct 1611843 ACTTCTTTACGCGCTTTTT-CATCAATAAAAGGCGCTGGTGCTTCTTCAATTACTTTTTG 1611901 Query 90 GTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTC 149 |||||||||||| | || ||||| || || || || || || || | ||| ||||| || Sbjct 1611902 GTGACGACGTTGTAAAGAACAATCACGATCACCTAGATGAATTGCATTGCCTTGGCCATC 1611961 Query 150 GGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 || | ||| || |||||||| || || || || ||| | || || ||||| ||||| Sbjct 1611962 AGATAATACCTGTACTTCCACATGGCGCGGATTAACAAGGAATTTCTCAAGGTAAACCAT 1612021 Query 210 CGGGTTGCCGAA 221 ||||| || || Sbjct 1612022 AGGGTTACCAAA 1612033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735823233040