Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq5489 93.3 1e-16 >seq5489 Length=15360 Score = 93.3 bits (102), Expect = 1e-16 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 230 ACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATG 289 ||| || ||||| | || ||||| || || || || || | ||| || || |||| || Sbjct 8852 ACGTCCAAGCATTTGTTTTGCCTCAGTACCTACCGCTACAATACTCTTTTGGCTACCTTG 8911 Query 290 GGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAAT 349 ||||| || || || ||||||||||| | ||||| || || || || | |||| Sbjct 8912 ATGGCGAATAGCAACTACTGATGGCTCATTTAATACGATGCCACGATCACGAATATAAAC 8971 Query 350 AAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTT 409 |||||| |||||||| || | ||||| || || || || ||||| | ||||| | || Sbjct 8972 AAGGGTATTGGCAGTACCTAAATCAATAGACAGGTCACTAGAAAAGAAACCACGTAACTT 9031 Query 410 CTTGAA 415 ||||| Sbjct 9032 TTTGAA 9037 Score = 82.4 bits (90), Expect = 2e-13 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 13 CTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGGGTGG 72 ||||||||||||||||| | || | |||||||| | ||| | || || || || | Sbjct 6643 CTTCACGGGCACCGGCGTGTAACGCTGCATCACGGATAGTACGTCTTTCAACTTGAGTTG 6702 Query 73 ACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAA 132 | || || || || ||||| || | ||| ||||| || | || ||||| ||||| || | Sbjct 6703 ATTTACAAGGTACACAGATTAGAATACGTGGGCTTGGTGGTAGTAAACTTTTTTCATGTA 6762 Query 133 CCTTGTTGATGAAGTACTGCAGCAT 157 | || ||||| ||||| | ||||| Sbjct 6763 CTTTATTGATAAAGTATTCAAGCAT 6787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353264415488