Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq373 145 5e-33 seq12270 120 2e-25 seq1991 116 3e-24 seq3885 114 9e-24 seq1599 114 9e-24 seq3213 111 1e-22 seq1924 109 4e-22 seq6689 105 5e-21 seq179 104 2e-20 seq2441 102 6e-20 seq3436 100 2e-19 seq9033 98.7 7e-19 seq3611 98.7 7e-19 seq126 95.1 9e-18 seq1702 91.5 1e-16 seq3099 80.6 2e-13 >seq373 Length=1274844 Score = 145 bits (160), Expect = 5e-33 Identities = 117/139 (84%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||| Sbjct 18224 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTAAGACCTA 18283 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | ||| ||||||| |||||| | |||||||| || ||| | Sbjct 18284 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTCAAGCGCGCTTTTGCCTTTATACTCT 18343 Query 121 CACTA-CGATTTCCGACCG 138 || | ||||||||||||| Sbjct 18344 -ACGACCGATTTCCGACCG 18361 >seq12270 Length=3675 Score = 120 bits (132), Expect = 2e-25 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 2682 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGCTCTA 2623 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | ||| || | |||| | |||| || |||||||| ||| |||||||||||| | Sbjct 2622 GTTTCCTACCTGATCGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCCATTGCACTCT 2563 Query 121 CACTACGATTTCCGACCGT 139 |||||| || | ||| Sbjct 2562 ACAGACGATTACCAAACGT 2544 >seq1991 Length=147557 Score = 116 bits (128), Expect = 3e-24 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| ||||||||||||| |||| || | ||||||||||||||| |||| Sbjct 142669 TACCTTTTATCCTTTGAGCGATGGCCAGTCCACGCAGAACCACCGGATCACTATACCCTG 142728 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| ||| || | ||| |||| || |||||||| ||| ||| |||||||| | Sbjct 142729 CTTTCGCACCTGTTCGACCTGTATGTCTCACAGTCAAGCACCCTTATGCTATTGCACTCT 142788 Query 121 CACTACGATTTCCGACCGT 139 |||||| || | ||| Sbjct 142789 ACGCACGATTACCAAACGT 142807 >seq3885 Length=21154 Score = 114 bits (126), Expect = 9e-24 Identities = 93/113 (82%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||| Sbjct 6777 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCCCTA 6718 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATT 113 |||| | ||| || | |||||| |||| || |||||| ||||| | ||||| Sbjct 6717 GTTTCCTACCTGATCGACTTGTTGGTCTCTCAGTCAAGCGCACTTATACCATT 6665 >seq1599 Length=3738065 Score = 114 bits (126), Expect = 9e-24 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 335029 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGCTCTA 335088 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | ||||| |||| || |||||||| ||| ||||||| |||| Sbjct 335089 GTTTCCTACCTGATCGACTTGTTAGTCTCCCAGTCAAGCACCCTTATGCCATTACACT 335146 >seq3213 Length=2170589 Score = 111 bits (122), Expect = 1e-22 Identities = 109/139 (78%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||| ||||||||||||||||||| || | ||||||||||||||| ||| Sbjct 607430 TAACTTTTATCCGATGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATATCCTA 607371 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | ||| || | |||| |||| || |||||| |||||| ||||||| | Sbjct 607370 CTTTCGTACCTGTTCGACTTGTATGTCTCACAGTCAAGCTAGTTTTTGCTATTGCAC--T 607313 Query 121 CACT--ACGATTTCCGACC 137 || | ||||||||||| Sbjct 607312 CAATGGTTGATTTCCGACC 607294 >seq1924 Length=441942 Score = 109 bits (120), Expect = 4e-22 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 333011 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 333070 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | |||| |||| || |||||||| ||| ||||||| |||| Sbjct 333071 GTTTCCTACCTGATCGACTTGTCTGTCTCCCAGTCAAGCACCCTTATGCCATTACACT 333128 >seq6689 Length=8825 Score = 105 bits (116), Expect = 5e-21 Identities = 94/118 (80%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| ||||||||||||||||||| | | |||||||||||||| ||| Sbjct 994 TACCTTTTATCCAATGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTAACACCGA 1053 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| |||||| || ||| |||| ||| |||||| | ||| ||| ||||||| Sbjct 1054 CTTTCGTCCCTGCTCGAGCTGTCACTCTTGCAGTCAAGCTCCCTTATGCGTTTGCACT 1111 >seq179 Length=2312354 Score = 104 bits (114), Expect = 2e-20 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||| Sbjct 504978 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATACGGAACCACCGGATCACTATGTCCTA 505037 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCC 110 |||| | |||||| | || | |||| || |||||||| ||| |||| Sbjct 505038 GTTTCCTACCTGCTCGACCCGTCGGTCTCACAGTCAAGCACCCTTATGCC 505087 >seq2441 Length=2995558 Score = 102 bits (112), Expect = 6e-20 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||| || |||||| || | ||||||||||||||| || Sbjct 253623 TACCTTTTATCCTTTGAGCGATGTCCTTTCCATACAGAAACACCGGATCACTATGCTCTA 253682 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | ||| || | |||| |||| || |||||||| ||| ||||||| |||| | Sbjct 253683 GTTTCCTACCTGATCGACTTGTAAGTCTCCCAGTCAAGCACCCTTATGCCATTACACTCT 253742 Query 121 CACTACGATTTCCGACCGT 139 | ||| || || | ||| Sbjct 253743 ACCGACGGTTACCAATCGT 253761 Score = 100 bits (110), Expect = 2e-19 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||| || |||||| || | ||||||||||||||| || Sbjct 1374780 TACCTTTTATCCTTTGAGCGATGTCCTTTCCATACAGAAACACCGGATCACTATGCTCTA 1374839 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | |||| |||| || |||||||| ||| ||||||| |||| Sbjct 1374840 GTTTCCTACCTGATCGACTTGTAAGTCTCCCAGTCAAGCACCCTTATGCCATTACACT 1374897 >seq3436 Length=2346199 Score = 100 bits (110), Expect = 2e-19 Identities = 93/118 (79%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||| || |||||| || | ||||||||||||||| || Sbjct 1076052 TACCTTTTATCCTTTGAGCGATGTCCTTTCCATACAGAAACACCGGATCACTATGCTCTA 1075993 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | |||| |||| || |||||||| ||| ||||||| |||| Sbjct 1075992 GTTTCCTACCTGATCGACTTGTAAGTCTCCCAGTCAAGCACCCTTATGCCATTACACT 1075935 >seq9033 Length=91990 Score = 98.7 bits (108), Expect = 7e-19 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||| || |||||| || | ||||||||||||||| || Sbjct 79000 TACCTTTTATCCTTTGAGCGATGTCCTTTCCATACAGAAACACCGGATCACTATGCTCTA 78941 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | ||| || | |||| |||| || |||||| | ||| ||||||| |||| | Sbjct 78940 GTTTCCTACCTGATCGACTTGTAAGTCTCCCAGTCAAGCGCCCTTATGCCATTACACTCT 78881 Query 121 CACTACGATTTCCGACCGT 139 | ||| || || | ||| Sbjct 78880 ACCGACGGTTACCAATCGT 78862 >seq3611 Length=178444 Score = 98.7 bits (108), Expect = 7e-19 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||| || |||||| || | ||||||||||||||| || Sbjct 49049 TACCTTTTATCCTTTGAGCGATGTCCTTTCCATACAGAAACACCGGATCACTATGCTCTA 48990 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | ||| || | |||| |||| || |||||| | ||| ||||||| |||| | Sbjct 48989 GTTTCCTACCTGATCGACTTGTAAGTCTCCCAGTCAAGCGCCCTTATGCCATTACACTCT 48930 Query 121 CACTACGATTTCCGACCGT 139 | ||| || || | ||| Sbjct 48929 ACCGACGGTTACCAATCGT 48911 >seq126 Length=3533043 Score = 95.1 bits (104), Expect = 9e-18 Identities = 93/119 (78%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAG-CCACCGGATCACTATGACCT 59 |||||||||||| ||||||||||||| |||||| | | |||||||||||||||| || Sbjct 3223935 TACCTTTTATCCTTTGAGCGATGGCCATTCCATACTGAAACCACCGGATCACTATGCTCT 3223876 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| || | |||| | |||| || |||||| | ||| | ||||| |||| Sbjct 3223875 AGTTTCCTACCTGATCGACTTGTAGGTCTCTCAGTCAAGCGCGCTTATACCATTACACT 3223817 >seq1702 Length=707479 Score = 91.5 bits (100), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAG-CCACCGGATCACTATGACCT 59 |||||||||||| ||||||||||||| |||||| | | |||||||||||||||| || Sbjct 81148 TACCTTTTATCCTTTGAGCGATGGCCATTCCATACTGAAACCACCGGATCACTATGCTCT 81207 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTA 119 |||| | ||| || | |||| | |||| || |||||| ||| | ||||| |||| Sbjct 81208 AGTTTCCTACCTGATCGACTTGTGGGTCTCTCAGTCAAGCGTGCTTATACCATTACACTC 81267 Query 120 TCACT-ACGATTTCCGACCGT 139 | ||| ||| || || | ||| Sbjct 81268 T-ACTGACGGTTACCAATCGT 81287 >seq3099 Length=1637421 Score = 80.6 bits (88), Expect = 2e-13 Identities = 90/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTC-ATAGCCACCGGATCACTATGACCT 59 |||||||||||| ||||||||||||| |||||| | | |||||||||||||||| || Sbjct 411248 TACCTTTTATCCTTTGAGCGATGGCCATTCCATACTGAAACCACCGGATCACTATGCTCT 411189 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||| | ||| | | |||| |||| || |||||| ||| | ||||| |||| Sbjct 411188 AGTTTCCTACCTGAGCGACTTGTCAGTCTCACAGTCAAGCGTGCTTATACCATTACACT 411130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351918186400