Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2720 208 1e-51 seq98 197 3e-48 seq697 183 6e-44 seq1910 158 2e-36 seq1042 134 3e-29 >seq2720 Length=46158 Score = 208 bits (230), Expect = 1e-51 Identities = 204/258 (79%), Gaps = 4/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | ||||| |||||| ||| |||||||||||||||| Sbjct 20624 CTTCTTAGAGGGACAAGCGGTGTTCAGCCGCACGAAGTT-GAG-CAATAACAGGTCTGTG 20567 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||||||||||| || || || | | | | Sbjct 20566 ATGCCCTTAGATGTCCAGGGCTGCACGCGCGCTACACTGGAGGAATCAGCGTGCTG-TAA 20508 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || | |||| |||| | ||||| | | ||| || |||| | ||||| | | |||| Sbjct 20507 CCATTGCCGAAAGGGATTGGTAACCCCTTGAAAATCCTCCGTGATCGGGATCGGGAATTG 20448 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | ||| |||||||||| ||||||||| | | ||||||||| | |||||||| Sbjct 20447 CAATTATTTCCCTTGAACGAGGAATTCCTAGTAAGTGTGAGTCATCAGCTCACGTTGATT 20388 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 20387 ACGTCCCTGCCCTTTGTA 20370 >seq98 Length=1778995 Score = 197 bits (218), Expect = 3e-48 Identities = 173/215 (80%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 67251 GCAATAACAGGTCTGTGATGTCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGG 67310 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | || || || | || || ||| |||| | |||||| | | || ||| ||||| Sbjct 67311 AATCAGCGTGTCCT---CCCTGCCCGAAAGGGCCGGGTAACCCGCTGAACCTCCTTCGTG 67367 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 || ||||| | | |||||||| || | | | |||||||||| || ||||| |||| ||| Sbjct 67368 CTAGGGATTGGGGCTTGCAATTGTTCCCCATGAACGAGGAATTCCCAGTAATCGCGAGTC 67427 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| |||| ||||||||||||||||||||||| Sbjct 67428 ATAAGCTCGCGGTGATTACGTCCCTGCCCTTTGTA 67462 >seq697 Length=1225817 Score = 183 bits (202), Expect = 6e-44 Identities = 199/258 (77%), Gaps = 7/258 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 ||||||||||||| |||||| |||| || | ||||| ||||||||||||||||| Sbjct 815147 CTTCTTAGAGGGATAGGCGGCTCCTGCCGCACGA-GATTGAG-CAATAACAGGTCTGTGA 815090 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||||||| | |||||||||||| || ||||| || | | Sbjct 815089 TGCCCTTAGATGTTCTGGGCCGCATGTGCGCTACACTGAAGGAATCAACGTGT---CCTC 815033 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTG-TTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | || ||| |||| | || ||| || | | || ||| | ||||| ||||| | | ||| Sbjct 815032 CCTGCCCGAAAGGGCCGGCTAA-CTCGCTGAACCTCCTTTGTGCTAGGGATTGGGGCTTG 814974 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | || ||||||| | ||||| |||| ||||| ||| | | ||||| Sbjct 814973 CAATTGTTCCCCATGAATGAGGAATTGCCAGTAATCGCGAGTCATAAGCTCATGGTGATT 814914 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 814913 ACGTCCCTGCCCTTTGTA 814896 >seq1910 Length=176071 Score = 158 bits (174), Expect = 2e-36 Identities = 170/222 (77%), Gaps = 5/222 (2%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| Sbjct 102479 AGATTGAG-CAATAACAGGTCTGTGATGCCCTCAGATGTTCTGGGCCGCACGTGCGCTAC 102537 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| || || | || | || || ||| |||| |||||||| || | || || Sbjct 102538 ACTGAAGGAATCAGCATGT---CCTCCCTGCCCGAAAGGGCTGGGTAACCTGCTAAATCT 102594 Query 226 CTGTCGTGCTGGGGA-TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 | ||||||| |||| | | | |||| ||| || | | | | | |||||| || | ||| Sbjct 102595 CCTTCGTGCTAGGGATTGGGGGCTTGCGATTGTTCCCCATGAGCAAGGAATTCCCAATAA 102654 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 |||| ||||| ||| | | |||||| |||||||||||||| Sbjct 102655 TCGCGAGTCATAAGCTCATGGTGATTATGTCCCTGCCCTTTG 102696 >seq1042 Length=645749 Score = 134 bits (148), Expect = 3e-29 Identities = 143/184 (78%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| |||||| ||||| || | ||||| |||||||||||||||| Sbjct 486638 CTTCTTAGAGGGACAGGCGGCTCCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 486695 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||| ||||||||||||||||||| || || || || | Sbjct 486696 ATGCCCTTAGATGTTCTGGGACGCACGCGCGCTACACTGAAGGAATCAGCGTGT---CCT 486752 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || || ||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 486753 CCCTGCCCGAAAGGGCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 486812 Query 251 CAAT 254 |||| Sbjct 486813 CAAT 486816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946965170176