Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2720 349 1e-93 seq118 309 1e-81 seq2757 264 4e-68 seq1468 219 1e-54 seq758 176 1e-41 seq406 154 5e-35 seq255 138 4e-30 seq2753 132 2e-28 seq874 116 1e-23 seq342 100 9e-19 seq2619 98.7 3e-18 seq2526 95.1 4e-17 seq193 91.5 5e-16 seq2077 80.6 9e-13 seq9935 78.8 3e-12 >seq2720 Length=46158 Score = 349 bits (386), Expect = 1e-93 Identities = 330/415 (80%), Gaps = 17/415 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| |||| || ||| |||| |||||||||||| ||||| | Sbjct 24670 CTTTTGCTCCACGAGAGGTTTCCGTCCTCTCTGAGCTAGCCTTAGGACACCCACGTTACG 24729 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| | ||||| ||||||||| |||||||||| ||||||| |||| || | || || Sbjct 24730 ATTTGATGGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCGGCGCGAGTC 24789 Query 127 GGCCCGCGAAGGAC--------CTTAACGCCAGAAA-ATGGTCGGTGAAG--ACCAGTTC 175 | |||| | || |||||| |||||| | | || ||| | || ||| Sbjct 24790 GTACCGCCACCGAGTGGCTGCACTTAACACCAGAATCACGATCCCGAAAGGGATCA-TTC 24848 Query 176 CGCTTCATT--GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAA 232 | | || | || |||||||| || |||| | |||||||||||||||| ||| ||||| Sbjct 24849 CTCGTCTTACCGAATAAGTAAAGAATCGATGAAAGTAGTGGTATTTCACTGGCGGCCGAA 24908 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||| |||||||||||| | | || ||| |||||||||||||||||| Sbjct 24909 GC--CTCCCACTTATGCTACACCTCTCATGACTCTTTACAGTGTCGGACTAGAGTCAAGC 24966 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 24967 TCAACAGGGTCTTCTTTCCCCGCTGTGTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 25026 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 25027 CTAGATAGTAGATAGAGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 25081 Score = 266 bits (294), Expect = 1e-68 Identities = 150/152 (99%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 16420 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTGGATGACGAGGCATTTG 16479 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16480 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 16539 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||| |||||||||||||||||||||||||| Sbjct 16540 ACTTTTACATTCAGAGCACTGGGCAGAAATCA 16571 >seq118 Length=2171285 Score = 309 bits (342), Expect = 1e-81 Identities = 226/264 (86%), Gaps = 15/264 (6%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC--------------G 230 || |||||||| ||||||| | | |||||||||||||| ||| | | Sbjct 1537956 GAGTAAGTAAAGAAACGATGAAAGCAGTGGTATTTCACTGGCGACGGGACCCGCGAGGAG 1538015 Query 231 AAACGGC-TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCA 289 || | || |||||||||| |||||||||||| ||| | ||| | | ||||||||||| Sbjct 1538016 AACCCGCTTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCA 1538075 Query 290 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTT 349 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 1538076 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCTCCAAGCCCGTTCCCTTGGCAGTGGTT 1538135 Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1538136 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCATCACTAA 1538195 Query 410 TTAGATGACGAGGCATTTGGCTAC 433 |||||||||||||||||||||||| Sbjct 1538196 TTAGATGACGAGGCATTTGGCTAC 1538219 Score = 113 bits (124), Expect = 1e-22 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| || ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 1537629 CTTTTGCTCCACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 1537688 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||| Sbjct 1537689 ATTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 1537748 >seq2757 Length=74530 Score = 264 bits (292), Expect = 4e-68 Identities = 152/156 (97%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 43931 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCTCCAAGCCCGTTCCCTT 43990 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 43991 GGCAGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 44050 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435 ||||| ||||||||||||||||||||||||||| || Sbjct 44051 GCGTCGCTAATTAGATGACGAGGCATTTGGCTAACT 44086 Score = 152 bits (168), Expect = 2e-34 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 44438 AGAGTCATAGTTGCTCCCGCCGTTTACCTGCGCTTGCTTGAATTTCTTCACTTTGACATT 44497 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||| || Sbjct 44498 CAGAGCACTGGGCAGAAATCACATTGCGTCAGCA 44531 >seq1468 Length=426819 Score = 219 bits (242), Expect = 1e-54 Identities = 153/174 (88%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||||| ||||||||||||||||| ||||||||| |||| | ||||||||| ||||||| Sbjct 300882 GTAGATGGGGACAGTGGGAATCTCTCTAATCCATTGATGCTCATCACTAATTTGATGACG 300941 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 ||| |||| ||| |||||||||||||||| ||||||||||| ||| ||| ||||| ||| Sbjct 300942 AGGTATTTAGCTGCCTTAAGAGAGTCATATTTACTCCCGCCATTTGCCCATGCTTGCTTG 301001 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||| |||||||| |||| || |||| || Sbjct 301002 AATTTCTTCACTTTGACATTCAGAGCACTAGGCAGAAAACACAGTGTGTCAGCA 301055 >seq758 Length=963276 Score = 176 bits (194), Expect = 1e-41 Identities = 123/138 (89%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT--CGGACTAGAGTCAAGCTC 294 ||||||||||| |||||||||||| ||| | | ||||| | || ||||||||||||| Sbjct 612441 CTCCCACTTATGCTACACCTCTCATGTC--TCCTTAAAGTGCCAGATTAGAGTCAAGCTC 612498 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||| Sbjct 612499 AACAGGGTCTTCTTTCCCCGCTGATTCCTCCAAGCCTGTTCCCTTGGCAGTGGTTTTGCT 612558 Query 355 AGATAGTAGATAGGGACA 372 |||||||||||||||||| Sbjct 612559 AGATAGTAGATAGGGACA 612576 Score = 118 bits (130), Expect = 3e-24 Identities = 71/75 (95%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 || |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct 613340 CCATTTACCCGCGCTTGCTTGAATTTCTTCACTTTGACATTCAGAACACTGGGCAGAAAT 613399 Query 519 CACATTGCGTCAACA 533 |||||||||||| || Sbjct 613400 CACATTGCGTCAGCA 613414 >seq406 Length=1424308 Score = 154 bits (170), Expect = 5e-35 Identities = 88/90 (98%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 464774 GTGGTTTCGCTATATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 464715 Query 404 CACTAATTAGATGACGAGGCATTTGGCTAC 433 |||||||||||||||||| ||||||||||| Sbjct 464714 CACTAATTAGATGACGAGACATTTGGCTAC 464685 Score = 100 bits (110), Expect = 9e-19 Identities = 62/65 (95%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 442 AGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCA 501 ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 461925 AGTCATAGTTACTCC-GCCGTTTACCCGCGCTTGCTTGAAATTCTTCACTTTGACATTCA 461867 Query 502 GAGCA 506 ||||| Sbjct 461866 GAGCA 461862 >seq255 Length=1801647 Score = 138 bits (152), Expect = 4e-30 Identities = 78/79 (99%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 629362 GTAGATAGGGACAGTGGGAATCTTGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 629303 Query 420 AGGCATTTGGCTACCTTAA 438 ||||||||||||||||||| Sbjct 629302 AGGCATTTGGCTACCTTAA 629284 >seq2753 Length=148082 Score = 132 bits (146), Expect = 2e-28 Identities = 84/91 (92%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 131999 ATAGGGACAGTGGCAATCTCGTTAATCCATTCATACGCATCACTAATTAGATGACGAGGC 132058 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACT 454 ||||| ||||||||||||||||| | || || Sbjct 132059 ATTTGACTACCTTAAGAGAGTCAGATTTCCT 132089 >seq874 Length=771265 Score = 116 bits (128), Expect = 1e-23 Identities = 73/79 (92%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 |||||| | ||||||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 353271 ACTCCCACAGTTTACCAGCGCTTGCTTGAATTTCTTTACTTTGACATTCAGAGCACTGGG 353212 Query 512 CAGAAATCACATTGCGTCA 530 |||||||||||||| |||| Sbjct 353211 CAGAAATCACATTGTGTCA 353193 >seq342 Length=1134428 Score = 100 bits (110), Expect = 9e-19 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||| ||||||||||||||||||||||| || || |||||| |||||| ||||||| || Sbjct 1063759 TTTCACTAGATAGTAGATAGGGACAGTGAGAGTCCCGTTAAAACATTCAAGCGCGTCGCT 1063700 Query 408 AATTAGATGACGAGGCATTT 427 ||||||| ||||||||| || Sbjct 1063699 AATTAGACGACGAGGCACTT 1063680 >seq2619 Length=172247 Score = 98.7 bits (108), Expect = 3e-18 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 14219 GCTGATTCCTCCAAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACA 14161 >seq2526 Length=112280 Score = 95.1 bits (104), Expect = 4e-17 Identities = 109/143 (76%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 188 TAAGTaaaaa-aaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG--CTCCCACT 244 ||||||| | || |||| |||||||||||||||| ||| || || || ||||| Sbjct 103036 TAAGTAACGACAAAAATAAAAGTAGTGGTATTTCACTGGCGACGGGACCCACCTGCCACT 102977 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 ||| ||||||||||| ||| | ||| | |||||||||||||||||||||||||| Sbjct 102976 TATGTTACACCTCTCATGTCTCCTTACAGTTCCAGACTAGAGTCAAGCTCAACAGGGTCT 102917 Query 305 TCTTTCCCCGCTGATTCCGCCAA 327 ||| || |||||||| |||| Sbjct 102916 TCTCTCATTACTGATTCC-CCAA 102895 >seq193 Length=1527572 Score = 91.5 bits (100), Expect = 5e-16 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 |||||||| || ||| ||||||| || |||| |||||||| |||||| |||| Sbjct 1282049 TTTTGCTCCACGCGAGGTTTCTGTCTTCACTGAGCTGGCCTTAGGAAACCTGCATTATTC 1281990 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 ||| |||||||||||||||||| |||||||||| |||| Sbjct 1281989 TTTGACAGATGTGCCGCCCCAGTCAAACTCCCCTCCTG 1281952 >seq2077 Length=183691 Score = 80.6 bits (88), Expect = 9e-13 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 450 TTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509 |||| ||| | ||||| || |||| ||||||||||| ||||||||||||||| | || Sbjct 63042 TTACACCCACAGTTTAGTAGCACTTGCTTGAATTTCTTTGCTTTGACATTCAGAGAATTG 63101 Query 510 GGCAGAAATCACAT 523 |||||||||||||| Sbjct 63102 GGCAGAAATCACAT 63115 >seq9935 Length=12840 Score = 78.8 bits (86), Expect = 3e-12 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 ||||||| | |||||| |||||| |||| |||| | ||| |||| ||| |||| Sbjct 3184 GACAGTGCCCAGATCGTTACACCATTCGTGCGGGTCAGAACTTACCTGACAAGGAATTTC 3243 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||| || || |||||||| |||||||||||| | |||| Sbjct 3244 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT 3289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634794601216