Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2720 426 5e-117 seq26 239 1e-60 seq1233 228 2e-57 seq877 199 1e-48 seq4488 165 2e-38 seq188 138 3e-30 seq4255 131 5e-28 seq16 129 2e-27 seq1895 120 9e-25 seq23886 114 4e-23 seq2153 105 2e-20 seq192 105 2e-20 seq86 86.0 2e-14 seq1520 82.4 2e-13 >seq2720 Length=46158 Score = 426 bits (472), Expect = 5e-117 Identities = 403/505 (80%), Gaps = 18/505 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| |||||| || || | | || | ||| | || || ||||| | |||||||||| Sbjct 21482 GTACCCATTCCGATAACCGGCCTCATA-GAGAACGGTCTCGTTATTTTTCGTCACTACCT 21540 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21541 CCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 21600 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||| Sbjct 21601 TCTCAGGCTCCCTCTCCGGAGTCGAACCCTTATTCTCCGTTACCCGTAACAACCATGGTA 21660 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| || ||||||||||||||||||| |||||| | |||| || | ||||||| Sbjct 21661 GGCACATAAACTACCATCGAAAGTTGATAAGGCAGACACTTGATAGACACGTCGCCGGTA 21720 Query 241 CAAGGCCATGCGATTCGTTA-AGTTATTATGAATCACCAAGGAGC---CCCGAAGGGCGT 296 | || ||||||||| | || || |||| || |||||||| | | | ||||| || Sbjct 21721 CGAGACCATGCGATCAGCTATAGCTATTCAGAGTCACCAAGAAACGAGCACGAAGCCCGA 21780 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATTAGC 355 | | |||| |||||||| || | | | | ||| |||| | ||| |||||||||||| Sbjct 21781 TTGGTTTTAATCTAATAGATGCGCTCGTCATGAA-TCGGAGCTTTGGTGCATGTATTAGC 21839 Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT--ATCAAATAAACGATAACTGAT 413 |||||||||||||| |||||||| ||| | || | ||| || ||| ||||||||| Sbjct 21840 TCTAGAATTACCACAGTTATCCAAGTA--ACTGTCTTTCATCTAAGGAACCATAACTGAT 21897 Query 414 TTAATGAGCCATTCGCAGTTTCACT---GTATAGATTGCTTATACTTAGACATGCATGGC 470 |||||||||||||||| |||||||| |||||| |||| ||| ||||||||||||| Sbjct 21898 TTAATGAGCCATTCGCGGTTTCACTTTAGTATAGCTTGC----ACTGAGACATGCATGGC 21953 Query 471 TTAATCTTTGAGACAAGCATATGAC 495 |||||||||||||||||||||| || Sbjct 21954 TTAATCTTTGAGACAAGCATATAAC 21978 Score = 118 bits (130), Expect = 3e-24 Identities = 88/103 (85%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184 |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 30482 AGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGTAGGCG 30541 Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 | ||| ||||||| |||||||| | |||| ||||||| || Sbjct 30542 CAAAACCTTCCATCGACAGTTGATAAGACAGACATTTGAAAGA 30584 >seq26 Length=2554240 Score = 239 bits (264), Expect = 1e-60 Identities = 164/184 (89%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| ||||| | || | | ||| || |||||| ||||| | ||||||||| Sbjct 2433911 GTGCTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCATTATTTTTCGTCACTACC 2433970 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2433971 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 2434030 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 2434031 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 2434090 Query 180 AGGC 183 |||| Sbjct 2434091 AGGC 2434094 >seq1233 Length=686608 Score = 228 bits (252), Expect = 2e-57 Identities = 181/217 (83%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| |||| | || | || ||| || ||||| |||| | ||||||||| Sbjct 380200 GTGCTCATTCCGATTATGGGGCCTCGAATGAGTCCCGTATCGTTATTATTCGTCACTACC 380141 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 380140 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 380081 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||| || ||||| |||||||||||||| |||||||||||| |||||||| Sbjct 380080 TTCTCAGACTACCTCTTCGGAATCGAACCCTGATTCCCCGTTAC-------AACCATGGT 380028 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216 |||| | |||||||||||||||||||| |||||| Sbjct 380027 AGGCGCAAAACCTACCATCGAAAGTTGATAAGGCAGA 379991 >seq877 Length=573560 Score = 199 bits (220), Expect = 1e-48 Identities = 234/308 (76%), Gaps = 29/308 (9%) Strand=Plus/Plus Query 218 ATTTGAATGAACCATCGCCGGCTCAAGG-CCATGCGATTCGTTA--AGTTATTATGAATC 274 ||||||| || | ||||||| | || ||||||||| | | | ||||| || || Sbjct 352633 ATTTGAAAGATGCGTCGCCGGTGCTTGGACCATGCGATCTGCCACAATTTATTCAGAGTC 352692 Query 275 ACCAAGGA-----GCCCCGAAGGGC-GTTGGTTTTTTATCTAATAAATACACCCCTTCCG 328 ||||||| | ||||| || | | | | |||| |||||||||| | |||||||| Sbjct 352693 ACCAAGGCAAACGGACCCGAGGGCCCGATTGGTTTTGATCTAATAAAAGCGTCCCTTCCG 352752 Query 329 AA----GTCGGG---GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT 381 |||||| | || |||||||||||||||||||||||||| |||||||| || Sbjct 352753 TCTCTGGTCGGGACAGAGTT--GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGT 352810 Query 382 AGTAAGGTACT--ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT- 438 | | || | ||| || ||| ||||||||||||||||||||||||| |||||||| Sbjct 352811 A--ACTGTCTTTCATCTAAGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACTT 352868 Query 439 --GTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 496 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 352869 TAGTATAGCTTGC----ACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACT 352924 Query 497 ACTGGCAG 504 |||||||| Sbjct 352925 ACTGGCAG 352932 >seq4488 Length=24375 Score = 165 bits (182), Expect = 2e-38 Identities = 100/106 (94%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 77 GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTC 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6882 GGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTC 6941 Query 137 CGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 |||||||||||||| |||||||||||||| || ||||| ||||| Sbjct 6942 CGGAATCGAACCCTGATTCCCCGTTACCCATTACAACCATCGTAGG 6987 >seq188 Length=1904979 Score = 138 bits (152), Expect = 3e-30 Identities = 100/115 (87%), Gaps = 7/115 (6%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT---GTATAGATTGC 449 ||| || ||| ||||||||||||||||||||||||| |||||||| |||||| |||| Sbjct 335280 ATCTAAGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACTTTAGTATAGCTTGC 335339 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 335340 ----ACTGAGACATGCATGGCTTCATCTTTGAGACAAGCATATGACTACTGGCAG 335390 >seq4255 Length=16910 Score = 131 bits (144), Expect = 5e-28 Identities = 95/108 (88%), Gaps = 4/108 (4%) Strand=Plus/Minus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTG---CTTATACT 456 ||| ||||||||||||||||||||||||| |||||||| || || | || |||| ||| Sbjct 3196 AACCATAACTGATTTAATGAGCCATTCGCGGTTTCACTTTAGTATACTGTAGCTTACACT 3137 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||| |||| |||||||||||| |||||||||||||||||| Sbjct 3136 TAGACATGCATAGCTTTATCTTTGAGACATGCATATGACTACTGGCAG 3089 >seq16 Length=3677052 Score = 129 bits (142), Expect = 2e-27 Identities = 116/141 (82%), Gaps = 10/141 (7%) Strand=Plus/Plus Query 371 GTTATCCATGTAGTAAGGTACTATCAAATAA---ACGATAACTGATTTAATGAGCCATTC 427 |||||||| ||| | || || ||| |||| || |||||||||||||||| |||||| Sbjct 2128823 GTTATCCAAGTA--ACTGT-CTTTCATATAAGGAACCATAACTGATTTAATGAACCATTC 2128879 Query 428 GCAGTTTCACTGTA-TAGATTG---CTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483 || |||||||| || || | || |||| |||||||||||||| |||| |||||||||| Sbjct 2128880 GCGGTTTCACTTTAGTATACTGTAGCTTACACTTAGACATGCATAGCTTTATCTTTGAGA 2128939 Query 484 CAAGCATATGACTACTGGCAG 504 || |||||||||||||||||| Sbjct 2128940 CATGCATATGACTACTGGCAG 2128960 >seq1895 Length=262319 Score = 120 bits (132), Expect = 9e-25 Identities = 97/116 (84%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| |||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 123320 GTGCTCATTCCGATTACAGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 123261 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 ||| |||| ||||| |||||||||||||| ||||||| |||||||||||||||||| Sbjct 123260 TCCTCGTGCCGGGAGTGGGTAATTTGCGCACCTGCTGTCTTCCTTGGATGTGGTAG 123205 >seq23886 Length=4805 Score = 114 bits (126), Expect = 4e-23 Identities = 86/100 (86%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 || |||||||||||||||||||||| | |||| | || || ||| ||| ||||||| Sbjct 1669 ATCACTGATTTAATGAGCCATTCGCGGCTTCATTTTAGT-ATAACTTTCACTGAGACATG 1727 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| |||||||||||||||| Sbjct 1728 CATGGCTTAATCTTTGAGACAAGTATATGACTACTGGCAG 1767 >seq2153 Length=284988 Score = 105 bits (116), Expect = 2e-20 Identities = 103/130 (79%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 || |||||||| ||||| | || | | ||| || ||| ||||| | | |||||| Sbjct 227765 GTGCTCATTCCGATTACGGGGCCTCGGATGAGTCCCATATTGTTATTTTTCATGACTACC 227706 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| | ||| |||||||| | || |||| ||||||||||||||||||||||||| Sbjct 227705 TCCCCGTGCCAGGAA-GGGTAATTAGAGCACCTGATGCCTTCCTTGGATGTGGTAGCCGT 227647 Query 120 TTCTCAGGCT 129 |||||||||| Sbjct 227646 TTCTCAGGCT 227637 >seq192 Length=2142093 Score = 105 bits (116), Expect = 2e-20 Identities = 93/115 (81%), Gaps = 7/115 (6%) Strand=Plus/Minus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT---GTATAGATTGC 449 ||| || ||| |||||||| ||| |||||| ||||| |||||||| |||||| |||| Sbjct 712276 ATCTAAGGAACTATAACTGAATTAGTGAGCCCTTCGCGGTTTCACTTTAGTATAGCTTGC 712217 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || || ||||||||||||||||||||| |||||||||| |||| |||||| Sbjct 712216 ----ACCAAGCCATGCATGGCTTAATCTTTGAAACAAGCATATTACTATTGGCAG 712166 >seq86 Length=2766441 Score = 86.0 bits (94), Expect = 2e-14 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1461498 GCTTGCACTGAGACATGCATGACTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1461554 >seq1520 Length=229578 Score = 82.4 bits (90), Expect = 2e-13 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89204 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 89248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510025541632