Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq714 105 5e-18 seq211 84.2 2e-11 >seq714 Length=734366 Score = 105 bits (116), Expect = 5e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || ||||| || || || || ||| || || |||||| ||||||||| | | Sbjct 44124 TTATTTAATGCTATTGAAACAATGCCGTGTGTAAAAAAGAAAGCAGATTGGGCCCTTCAG 44065 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| | | | || || |||| ||| || || || | |||||||| | || ||| Sbjct 44064 TGGATTGCAAATGATACTGCAACATATGGCGAGAGAGTGGTAGCATTTGCTGCAGTGGAG 44005 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 ||| | || ||| || ||||| |||| || ||| |||||||| | ||||||||| Sbjct 44004 GGTATTTTCTTCTCCGGGAGCTTTGCTTCAATTTTCTGGCTGAAGAAAAGAGGACTTATG 43945 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 || || |||| |||||||| || ||||| ||| | || |||| Sbjct 43944 CCAGGATTGACTTTCAGCAACGAATTGATTTCAAGGGATGAGG 43902 >seq211 Length=1809889 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 66275 TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334 || || |||| ||||| ||||||||||||||| ||| ||| | | ||| Sbjct 909909 TCTGAAAGACCAGGACAAGCGTGTGGACACATCAGGCTCCACATTTCATTGAGCTTAACA 909850 Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394 || ||| || |||||||| |||||||| || ||||| | || | |||| || Sbjct 909849 CGTTCCATGAAAAGATCAGGAATCCAGAGCGCATAGAACATGTCTCTGGCTCTAATTTCT 909790 Query 66395 TCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTC 66453 || |||| ||| ||||| |||||| ||||| ||||| | ||| |||||||||||||| Sbjct 909789 TCTTTGCCAGTG-TTTTTCTTCAAGTCAAGGAATTCAAACACGTCAGCATGCCATGGTTC 909731 Query 66454 CAGGTAGA 66461 || |||| Sbjct 909730 CAAATAGA 909723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397447873834880