Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq714 105 5e-18
seq211 84.2 2e-11
>seq714
Length=734366
Score = 105 bits (116), Expect = 5e-18
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455
|| || ||||| || || || || ||| || || |||||| ||||||||| | |
Sbjct 44124 TTATTTAATGCTATTGAAACAATGCCGTGTGTAAAAAAGAAAGCAGATTGGGCCCTTCAG 44065
Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515
||||| | | | || || |||| ||| || || || | |||||||| | || |||
Sbjct 44064 TGGATTGCAAATGATACTGCAACATATGGCGAGAGAGTGGTAGCATTTGCTGCAGTGGAG 44005
Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575
||| | || ||| || ||||| |||| || ||| |||||||| | |||||||||
Sbjct 44004 GGTATTTTCTTCTCCGGGAGCTTTGCTTCAATTTTCTGGCTGAAGAAAAGAGGACTTATG 43945
Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618
|| || |||| |||||||| || ||||| ||| | || ||||
Sbjct 43944 CCAGGATTGACTTTCAGCAACGAATTGATTTCAAGGGATGAGG 43902
>seq211
Length=1809889
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 66275 TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334
|| || |||| ||||| ||||||||||||||| ||| ||| | | |||
Sbjct 909909 TCTGAAAGACCAGGACAAGCGTGTGGACACATCAGGCTCCACATTTCATTGAGCTTAACA 909850
Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394
|| ||| || |||||||| |||||||| || ||||| | || | |||| ||
Sbjct 909849 CGTTCCATGAAAAGATCAGGAATCCAGAGCGCATAGAACATGTCTCTGGCTCTAATTTCT 909790
Query 66395 TCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTC 66453
|| |||| ||| ||||| |||||| ||||| ||||| | ||| ||||||||||||||
Sbjct 909789 TCTTTGCCAGTG-TTTTTCTTCAAGTCAAGGAATTCAAACACGTCAGCATGCCATGGTTC 909731
Query 66454 CAGGTAGA 66461
|| ||||
Sbjct 909730 CAAATAGA 909723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397447873834880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |