Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq1991 118 2e-21
seq2441 100 4e-16
seq4013 93.3 7e-14
seq2330 93.3 7e-14
seq1948 93.3 7e-14
seq1599 93.3 7e-14
seq1210 93.3 7e-14
seq1164 93.3 7e-14
seq5010 87.8 3e-12
seq3436 87.8 3e-12
seq2760 87.8 3e-12
seq1094 87.8 3e-12
seq373 87.8 3e-12
seq126 87.8 3e-12
>seq1991
Length=147557
Score = 118 bits (130), Expect = 2e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 196163 CAGATGCGCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTG 196222
||||||||||| || || | || || || || | | ||||| || ||||| |||||
Sbjct 6573 CAGATGCGCTTTGACCTCAATGAGGGTTTTCCCGTACTGACCACAAAAAAACTGCATCTA 6514
Query 196223 CGTTCCATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTG 196282
|| || ||||| |||||||| |||||||| ||||| || || ||||| || || || ||
Sbjct 6513 CGCTCGATCATACATGAACTTCTGTGGTTTCTCAAGGGAGATACCAATATAAAATATCTT 6454
Query 196283 AATGACAACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCG 196342
| || || || | || ||| ||||||||||| | | ||| |||||||| |||
Sbjct 6453 CACGATAATAACGTTACGATATGGGACGAGTGGGCGGATGCCGACGGCAACCTGGGCCCG 6394
Query 196343 GTTTACGGTAAGCAGTGGCG 196362
|| ||||| | ||||||||
Sbjct 6393 GTCTACGGATACCAGTGGCG 6374
>seq2441
Length=2995558
Score = 100 bits (110), Expect = 4e-16
Identities = 149/209 (71%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 196116 ACAAAGCTGACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTC 196174
|||||| |||||||| |||||||| || | | | ||| |||| |||||||| ||
Sbjct 2867137 ACAAAGAAGACCGTACAGGCACAGGAACAATCAGCGTAT-TCGGACACCAGATGCGTTTT 2867079
Query 196175 GATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATT 196234
|| || | || || ||||| | || || ||||| || || ||| ||||| |||
Sbjct 2867078 GACCTTAACGATGGTTTCCCATGCCTGACTACCAAGAAGCTTCACCTGAAATCCATTATT 2867019
Query 196235 CATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGT 196294
|||||||| || ||||| | || || || || || | |||||||| | ||||||||
Sbjct 2867018 CATGAACTTCTATGGTTTTTGAAAGGTGATACAAATGTTAAGTACCTCCAAGACAACGGA 2866959
Query 196295 GTCTCTATCTGGAACGAGTGGGCGAACGA 196323
|| ||||||||| || ||||| ||||
Sbjct 2866958 GTACGTATCTGGAATGAATGGGCAGACGA 2866930
>seq4013
Length=24576
Score = 93.3 bits (102), Expect = 7e-14
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 3383 GTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 3442
Query 3857 C 3857
|
Sbjct 3443 C 3443
>seq2330
Length=1066040
Score = 93.3 bits (102), Expect = 7e-14
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 21579 GTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 21520
Query 3857 C 3857
|
Sbjct 21519 C 21519
>seq1948
Length=475166
Score = 93.3 bits (102), Expect = 7e-14
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 65 GTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 6
Query 3857 C 3857
|
Sbjct 5 C 5
>seq1599
Length=3738065
Score = 93.3 bits (102), Expect = 7e-14
Identities = 59/64 (92%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 254 GTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 195
Query 3857 CAGT 3860
| ||
Sbjct 194 CCGT 191
>seq1210
Length=1188399
Score = 93.3 bits (102), Expect = 7e-14
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 1016596 GTAGTTCAGCTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 1016655
Query 3857 C 3857
|
Sbjct 1016656 C 1016656
>seq1164
Length=549247
Score = 93.3 bits (102), Expect = 7e-14
Identities = 57/61 (93%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||||
Sbjct 388123 GTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGTGGTCGCGGGTTCGAGTCCCGT 388064
Query 3857 C 3857
|
Sbjct 388063 C 388063
>seq5010
Length=14642
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 5608 GTAGTTCAGTTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGAGTCCCGT 5549
Query 3857 C 3857
|
Sbjct 5548 C 5548
>seq3436
Length=2346199
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 837868 GTAGTTCAGTTGGTTAGAATACATGCCTGTCACGCATGGGGTCGCGGGTTCGAGTCCCGT 837927
Query 3857 C 3857
|
Sbjct 837928 C 837928
>seq2760
Length=692328
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 10912 GTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 10853
Query 3857 C 3857
|
Sbjct 10852 C 10852
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 464483 GTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 464542
Query 3857 C 3857
|
Sbjct 464543 C 464543
>seq1094
Length=2708314
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 1549114 GTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 1549055
Query 3857 C 3857
|
Sbjct 1549054 C 1549054
>seq373
Length=1274844
Score = 87.8 bits (96), Expect = 3e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||| | ||||||||||||| | |||||||||||||| ||||||
Sbjct 707174 GTAGTTCAGTTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAGTCCCGT 707115
Query 3857 CAGTCCTGCCATA 3869
| || ||||||
Sbjct 707114 CCGTTGCGCCATA 707102
>seq126
Length=3533043
Score = 87.8 bits (96), Expect = 3e-12
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
||||||||| |||||||||||| ||||||||||||| | |||||||||||||| ||||||
Sbjct 377216 GTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGT 377275
Query 3857 C 3857
|
Sbjct 377276 C 377276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 771303299010240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |