Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031901.1 Length=42927 Score E Sequences producing significant alignments: (Bits) Value seq1191 80.6 7e-11 >seq1191 Length=1801643 Score = 80.6 bits (88), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 3/113 (3%) Strand=Plus/Plus Query 23212 ATTGTTTTGCtttttttAACATTTT---ACTCCTCCGTTTTTTCGTATGTTTCTGCAAAA 23268 ||||||||| ||| ||| |||||| | || || | ||| |||||||| |||| Sbjct 1465316 ATTGTTTTGTTTTCTTTGCCATTTTCTTATTCTTCTACTGGTTCATATGTTTCATGAAAA 1465375 Query 23269 ATATCCGGCTTGCATGGATAATATTCTCCTTGCACGCCTTTGATAATATAATC 23321 |||||||| || ||||||||| |||||||| || |||| ||||| |||||| Sbjct 1465376 ATATCCGGTTTACATGGATAAATTTCTCCTTTTACACCTTGGATAAGATAATC 1465428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137204394444656