Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031906.1
Length=198190
Score E
Sequences producing significant alignments: (Bits) Value
seq3496 102 1e-16
seq1991 102 1e-16
seq126 96.9 4e-15
seq1971 89.7 7e-13
seq1164 89.7 7e-13
seq9033 87.8 2e-12
seq3812 87.8 2e-12
seq3611 87.8 2e-12
seq2787 87.8 2e-12
seq1885 87.8 2e-12
seq1702 87.8 2e-12
seq3436 86.0 8e-12
seq2441 86.0 8e-12
seq1924 86.0 8e-12
seq1599 86.0 8e-12
>seq3496
Length=15201
Score = 102 bits (112), Expect = 1e-16
Identities = 68/75 (91%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||
Sbjct 7699 CGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGA 7640
Query 19388 ATCCGATATTCTCCA 19402
||||||||||||||
Sbjct 7639 CTCCGATATTCTCCA 7625
>seq1991
Length=147557
Score = 102 bits (112), Expect = 1e-16
Identities = 68/75 (91%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||
Sbjct 145188 CGGGGAATTAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGA 145129
Query 19388 ATCCGATATTCTCCA 19402
||||||||||||||
Sbjct 145128 CTCCGATATTCTCCA 145114
>seq126
Length=3533043
Score = 96.9 bits (106), Expect = 4e-15
Identities = 67/75 (89%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||| ||||||||| | | |||||||||||| ||||| ||||||||| ||||||||||
Sbjct 3221219 CGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCATCGGTTCGA 3221278
Query 19388 ATCCGATATTCTCCA 19402
|||||||||||||||
Sbjct 3221279 ATCCGATATTCTCCA 3221293
>seq1971
Length=148721
Score = 89.7 bits (98), Expect = 7e-13
Identities = 73/88 (83%), Gaps = 2/88 (2%)
Strand=Plus/Minus
Query 19320 ACTACTTTGGCGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTT 19377
||||| | | |||| ||||||||| | | |||||||||||| ||||| |||||||||
Sbjct 104917 ACTACCTAAGAGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTC 104858
Query 19378 ATCGGTTCGAATCCGATATTCTCCATAA 19405
| ||||||||||||| ||||||||| ||
Sbjct 104857 AACGGTTCGAATCCGTTATTCTCCACAA 104830
>seq1164
Length=549247
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/76 (87%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 19528 ATTCCTCTATAGCTCAATCGGC-AGAGCATCTGACTGTTAATCAGAGGGTTCCTGGTTCG 19586
||||||| ||||||| |||| ||||||||||||||||||||||||||| | |||||||
Sbjct 296222 ATTCCTCCTTAGCTCAGTCGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCG 296281
Query 19587 AGTCCAGGTGGAGGAG 19602
|| ||| | |||||||
Sbjct 296282 AGCCCAAGAGGAGGAG 296297
>seq9033
Length=91990
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||| ||||||||| | | |||||||||||| ||||| ||||||||| | ||||||||
Sbjct 76303 CGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGA 76362
Query 19388 ATCCGATATTCTCCA 19402
||||| |||||||||
Sbjct 76363 ATCCGTTATTCTCCA 76377
>seq3812
Length=12487
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||| ||||||||| | | |||||||||||| ||||| ||||||||| | ||||||||
Sbjct 3486 CGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGA 3427
Query 19388 ATCCGATATTCTCCA 19402
||||| |||||||||
Sbjct 3426 ATCCGTTATTCTCCA 3412
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||| ||||||||| | | |||||||||||| ||||| ||||||||| | ||||||||
Sbjct 8489 CGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGA 8430
Query 19388 ATCCGATATTCTCCA 19402
||||| |||||||||
Sbjct 8429 ATCCGTTATTCTCCA 8415
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388
|||| ||||||||| | | |||||||||||| ||||| ||||||||| | |||||||||
Sbjct 3340 GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 3281
Query 19389 TCCGATATTCTCCA 19402
|||| |||||||||
Sbjct 3280 TCCGTTATTCTCCA 3267
>seq3611
Length=178444
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||| ||||||||| | | |||||||||||| ||||| ||||||||| | ||||||||
Sbjct 46350 CGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGA 46409
Query 19388 ATCCGATATTCTCCA 19402
||||| |||||||||
Sbjct 46410 ATCCGTTATTCTCCA 46424
>seq2787
Length=1710943
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||| ||||||||| | | |||||||||||| ||||| ||||||||| | ||||||||
Sbjct 407370 CGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGA 407311
Query 19388 ATCCGATATTCTCCA 19402
||||| |||||||||
Sbjct 407310 ATCCGTTATTCTCCA 407296
>seq1885
Length=148911
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/75 (87%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 19330 CGGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGA 19387
||||| ||||||||| | | |||||||||||| ||||| ||||||||| | ||||||||
Sbjct 14338 CGGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGA 14397
Query 19388 ATCCGATATTCTCCA 19402
||||| |||||||||
Sbjct 14398 ATCCGTTATTCTCCA 14412
>seq1702
Length=707479
Score = 87.8 bits (96), Expect = 2e-12
Identities = 66/77 (86%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388
|||| ||||||||| | | |||||||||||| ||||| ||||||||| | |||||||||
Sbjct 83846 GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 83787
Query 19389 TCCGATATTCTCCATAA 19405
|||| ||||||||| ||
Sbjct 83786 TCCGTTATTCTCCACAA 83770
>seq3436
Length=2346199
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388
|||| ||||||||| | | |||||||||||| ||||| ||||||||| | |||||||||
Sbjct 1073352 GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 1073411
Query 19389 TCCGATATTCTCCA 19402
|||| |||||||||
Sbjct 1073412 TCCGTTATTCTCCA 1073425
>seq2441
Length=2995558
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388
|||| ||||||||| | | |||||||||||| ||||| ||||||||| | |||||||||
Sbjct 256325 GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 256266
Query 19389 TCCGATATTCTCCA 19402
|||| |||||||||
Sbjct 256265 TCCGTTATTCTCCA 256252
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388
|||| ||||||||| | | |||||||||||| ||||| ||||||||| | |||||||||
Sbjct 1377763 GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 1377704
Query 19389 TCCGATATTCTCCA 19402
|||| |||||||||
Sbjct 1377703 TCCGTTATTCTCCA 1377690
>seq1924
Length=441942
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388
|||| ||||||||| | | |||||||||||| ||||| ||||||||| | |||||||||
Sbjct 335707 GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 335648
Query 19389 TCCGATATTCTCCA 19402
|||| |||||||||
Sbjct 335647 TCCGTTATTCTCCA 335634
>seq1599
Length=3738065
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Minus
Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388
|||| ||||||||| | | |||||||||||| ||||| ||||||||| | |||||||||
Sbjct 337734 GGGGGATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 337675
Query 19389 TCCGATATTCTCCA 19402
|||| |||||||||
Sbjct 337674 TCCGTTATTCTCCA 337661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633883498608000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |