Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq2029 114 4e-21 >seq2029 Length=231691 Score = 114 bits (126), Expect = 4e-21 Identities = 189/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 33654 ATCAGTCCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAG 33713 |||||||||||| | || | | | ||||| | ||| | | ||| ||||| | Sbjct 11520 ATCAGTCCATTTACGGGTTTGTAGACGGCCTTCTACATACAGCTTTGAACCTTTATGCAC 11579 Query 33714 ATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTG 33773 ||| | ||| | |||||||| | ||| ||||||| ||||||||||||||||| || | Sbjct 11580 ATATTGCCCAACGATTTCAGCTAACTTACCAAAGAATACTACGCGGTGCCATTCGGTACG 11639 Query 33774 CTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTT 33833 |||| || ||||||||| ||||| ||||||| || || || || | ||| || | Sbjct 11640 TTCCTGTTGTTCACCAGTATTTTTATCTTTCCATGCGTCAGAAGTGGCTAAAGAAACAGT 11699 Query 33834 GGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAG 33893 || || || ||| || ||||| || |||| |||||| || | || | | |||| Sbjct 11700 TGCTACTGCATTGCCGTTAGGCATATAGCGCATTTCTGGCTCATTACCAATATTACCGAC 11759 Query 33894 GATGATTACTTTATTTACGCCGCGAGTTGCCAT 33926 | || |||||||| | || | || |||||| Sbjct 11760 TAATATAACTTTATTAATACCTCTAGCTGCCAT 11792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144930119282816