Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_031918.1
Length=45342
Score E
Sequences producing significant alignments: (Bits) Value
seq2029 114 4e-21
>seq2029
Length=231691
Score = 114 bits (126), Expect = 4e-21
Identities = 189/273 (69%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 33654 ATCAGTCCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAG 33713
|||||||||||| | || | | | ||||| | ||| | | ||| ||||| |
Sbjct 11520 ATCAGTCCATTTACGGGTTTGTAGACGGCCTTCTACATACAGCTTTGAACCTTTATGCAC 11579
Query 33714 ATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTG 33773
||| | ||| | |||||||| | ||| ||||||| ||||||||||||||||| || |
Sbjct 11580 ATATTGCCCAACGATTTCAGCTAACTTACCAAAGAATACTACGCGGTGCCATTCGGTACG 11639
Query 33774 CTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTT 33833
|||| || ||||||||| ||||| ||||||| || || || || | ||| || |
Sbjct 11640 TTCCTGTTGTTCACCAGTATTTTTATCTTTCCATGCGTCAGAAGTGGCTAAAGAAACAGT 11699
Query 33834 GGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAG 33893
|| || || ||| || ||||| || |||| |||||| || | || | | ||||
Sbjct 11700 TGCTACTGCATTGCCGTTAGGCATATAGCGCATTTCTGGCTCATTACCAATATTACCGAC 11759
Query 33894 GATGATTACTTTATTTACGCCGCGAGTTGCCAT 33926
| || |||||||| | || | || ||||||
Sbjct 11760 TAATATAACTTTATTAATACCTCTAGCTGCCAT 11792
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144930119282816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |