Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_031932.1 Length=42702 Score E Sequences producing significant alignments: (Bits) Value seq848 109 1e-19 >seq848 Length=737977 Score = 109 bits (120), Expect = 1e-19 Identities = 136/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 26698 ATTCaaaaaaaGAGACGTTGCAATTGAAACGGATGAACAATATCCGCAAAAAATATTGAT 26757 ||| ||||||||||| | | ||| || | ||||||||||||||| | |||||||| Sbjct 123177 ATTTAAAAAAAGAGAAATCGTAATCACCACACAAGAACAATATCCGCAAGACATATTGAT 123118 Query 26758 AGAATTCACGCAAGACAAATGCGAT-TTATTAAATAATTACAAACTTGATGATGTTGTAA 26816 |||||| || || |||| | |||| || |||| | || | | | ||| | ||| | Sbjct 123117 AGAATTTACCCAGGACAGAACCGATCTTCTTAACACGGTTCAGA-TCGGTGAAGATGTGA 123059 Query 26817 AAATTGCAATCAACATCAACGGTCGTGAATGGATCAATCCGCAAGGCGaaaaaaaaTATT 26876 |||| | |||||||| ||| || ||||||||||||||| |||| | | |||||||| Sbjct 123058 AAATCTCCATCAACATACGCGGACGCGAATGGATCAATCCGGAAGGTGTAGCAAAATATT 122999 Query 26877 TCAA 26880 |||| Sbjct 122998 TCAA 122995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136484606416256