Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_032139.1 Length=1743 Score E Sequences producing significant alignments: (Bits) Value seq246 143 3e-31 >seq246 Length=1561655 Score = 143 bits (158), Expect = 3e-31 Identities = 297/437 (68%), Gaps = 10/437 (2%) Strand=Plus/Plus Query 491 ATTACCCGATACGTGTGCCTTCATGAGAGTTCAACTTGCTAAGGAAGACAAACAAAAGAT 550 |||||| ||||| || || ||| | |||| |||| |||| | | ||| || | || || Sbjct 1309284 ATTACCGGATACTTGCGCTTTCTTTAGAGCTCAATTTGCCGACGTAGATAAGAATAAAAT 1309343 Query 551 CAGAGCAGTGTGGGGTACCCCCACTGATGTAATTGCTGAAGAGGCACGATTTTTCCTTCC 610 | | || || |||||||| |||| |||||| || ||||| || || |||||| || Sbjct 1309344 CCGTGCCGTATGGGGTACTCCCATTGATGTCATCGCTGAGGAATATCGGTTTTTCAAACC 1309403 Query 611 TTATATGGCTAAGCT-GAAACTATCTGATGCACCTATTGCGTACCGAGCCGAAATGGCTA 669 ||||| || | | || | | | |||||||| ||||||||| | | || ||||| | Sbjct 1309404 ATATATCACTTGGTTAGAGGCCACC-GATGCACCAATTGCGTACAGTGTAGAGATGGCAA 1309462 Query 670 CCGGAGGTATGTCACTAATTAATGACATGTGCCAGTCACACCC---GGGTGC-TAAATAT 725 | ||||| ||||| ||||||||||||| ||||| ||| | | || | ||| Sbjct 1309463 CTGGAGGCATGTCTTATATTAATGACATGT----GTCACGCCCATAGAGGGCAGACGTAT 1309518 Query 726 TTAATGACTGATTTGTCACAGTTCGACAAGAGCGTACCGCCATGGTTAATTCGCGATGCG 785 || ||||| |||| ||||| ||||| | |||| | ||||| |||| ||||| Sbjct 1309519 TTGATGACGGATTATTCACAATTCGATAGCTCAATACCAGCGTGGTTGATTCAAGATGCA 1309578 Query 786 TTTGGGATCGTTATGGAAAATTTCGATTTTACTAGAGTCGTTGGAAGTGATGGTAAGGTC 845 || || || | || ||| ||||| || | ||||| || | |||||| Sbjct 1309579 TTCCATATTGTCTTCGATTCTTTTGATTTATCTCATGCAATTGGATCAGACGATAAGGTA 1309638 Query 846 TGGGATGTCAATCCTGATCGTACTAAGCGTCGTATTTCGCGTATGATCGACTATTTTATC 905 || |||| ||||| | ||| || |||| | ||| || | ||| ||||||| ||| Sbjct 1309639 AGGAATGTGAATCCCGCTCGCTCTCAGCGCAGGATTCGACGCCTCATCAACTATTTCATC 1309698 Query 906 AACACTCCAGTTAGACT 922 || |||||| || |||| Sbjct 1309699 AATACTCCAATTCGACT 1309715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5467359436048