Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq570 114 5e-23 >seq570 Length=7012 Score = 114 bits (126), Expect = 5e-23 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| | |||| ||| || |||||| |||| | || |||||| | | ||||| ||||||| Sbjct 668 GAGTAGGGTTGCTTGAGAGTGCAGCCCTAAGTTGGTGGTAAACTCCATCTAAGGCTAAAT 609 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||||||||||||| ||||||| |||| |||| ||||||| |||||| | Sbjct 608 ACAACCACGAGACCGATAGCGAACAAGTACCGTGAGGAAAAGTTGAAAAGAACTTTGAAG 549 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 548 AGAGAGTTCAAGAGTACGTGAAA 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079880759450