Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22]
5,559 sequences; 249,185,056 total letters
Query= AAMG01001188.1
Length=621
Score E
Sequences producing significant alignments: (Bits) Value
seq1913 170 7e-40
>seq1913
Length=212763
Score = 170 bits (188), Expect = 7e-40
Identities = 387/576 (67%), Gaps = 6/576 (1%)
Strand=Plus/Minus
Query 10 TTTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGA 69
|||||| ||||| || || ||| || | ||| | || || || ||||| ||| |
Sbjct 156032 TTTGGCGCGGGAGGTCGC-TTGTTTAGA--TTTAGCCGCATTGGCACTAAAACGACTT-A 155977
Query 70 CGAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTG 129
| || |||| | | ||| | || ||||| || ||||||||| || || | |||| |
Sbjct 155976 CAAACGATT-GTAATTCGCTAATTTGCGCTTT-TTTCTTGGCATTATCAGCTAGCAAACG 155919
Query 130 CTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAG 189
|| || | || || || ||||||| || || ||||| || || || | | ||| ||
Sbjct 155918 TTCACGCGCTTGCGTGGCAGCGGTCATATAGTCATCGTAATTACCTGGATAAATGCGTAG 155859
Query 190 CTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTG 249
|| || ||||| | || ||||| || ||||| || | || || || || || || ||
Sbjct 155858 TTCACCATAGTCTAAATCCGCCATATGAGTACATACCATATTAAGAAAATGGCGATCATG 155799
Query 250 AGAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGT 309
||||| ||||||||| || ||| | | || ||||| || ||||| || || ||
Sbjct 155798 GGAGATAATGATCATCGTACTTTCACGTTCATTAAGTATATTCTCTAGCCAACGAATAGT 155739
Query 310 GTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAG 369
| || || | || ||||||||||| || | || || | || |||| ||||| ||
Sbjct 155738 ATCAATATCAAGGTTATTGGTCGGTTCATCCAATAATAGAATATCTGGATTTGAAAATAG 155679
Query 370 CGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAA 429
|| || || | |||||| |||| ||||| || || | | ||| ||||| || |
Sbjct 155678 GGCTTGAGCTAACAATACGCGCAATTTCCAACCAGGCGCAATTTCACTCATTAACCCATA 155619
Query 430 GTGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGT 489
||| ||||| | |||||||| | ||| | | || ||||| || || | |||||| |
Sbjct 155618 GTGTTGCTCAATAGGAATACCTACACCTAATAAAAGTTCACCTGCGCGCGCTTCGGCACT 155559
Query 490 GTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCCGTCTTCTTC 549
|| || ||||| || ||| | | ||| || ||||| || || ||||||||
Sbjct 155558 ATATCCATCCATTTCTGCGTATTGAACTTCAAGATCGGCAACCTTATACCCATCTTCTTC 155499
Query 550 GCTCATTTCCGGCAGCGAGTAAATACCATCACGCTC 585
|||||||| | | | ||||||| ||| || ||
Sbjct 155498 ACTCATTTCAGCTAAGGCATAAATACGATCGCGTTC 155463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1881492133164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |