Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22]
5,559 sequences; 249,185,056 total letters
Query= AAMG01001449.1
Length=395
Score E
Sequences producing significant alignments: (Bits) Value
seq2372 143 6e-32
>seq2372
Length=84335
Score = 143 bits (158), Expect = 6e-32
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 35 TTCCCGTTCCTGTTCATCACCATTGCCTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATC 94
||||| ||||| || || |||||||||||||| || || || || |||||||| | |||
Sbjct 67984 TTCCCATTCCTATTTATTACCATTGCCTGTGGTGCCGTGTCTGGGTTCCATGCCTTAATC 68043
Query 95 TCCTCGGGCACCACGCCCAAGTTGCTCGCCAGTGAGAGCCATGCCCGTTACATCGGTTAC 154
|| || ||||| ||||| || ||| | || | ||||| ||||||||| ||||| ||
Sbjct 68044 TCATCAGGCACTACGCCAAAATTGATGGCTATTGAGACGGATGCCCGTTTTATCGGCTAT 68103
Query 155 GGCGGCATGCTGATGGAGTCGTTCGTGGCCATCATGGCGATGGTTGCCGCCTCGGTGATT 214
|| | ||| | ||||||||||| || ||||| ||||| ||||||| || || | |||
Sbjct 68104 GGTGCGATGTTAATGGAGTCGTTTGTTGCCATTATGGCTTTGGTTGCAGCGTCTATTATT 68163
Query 215 GAGCCCGGCGTGTACTTCGCCATGAACAGCCCGGCTGCC 253
|| || || | ||||| | ||||| | ||| || ||
Sbjct 68164 GAACCTGGGTTATACTTTGTAATGAATACACCGCCTTCC 68202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1161535426656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |