Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22]
5,559 sequences; 249,185,056 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq3761 114 3e-23
>seq3761
Length=42113
Score = 114 bits (126), Expect = 3e-23
Identities = 276/414 (67%), Gaps = 8/414 (2%)
Strand=Plus/Minus
Query 12 ACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCCACCTGGGTG 71
|| ||||| || || ||||| | || ||||| || || ||||| || || || || ||
Sbjct 8783 ACCTCACGAGCCCCAGCGCCTAACGCTGATTCTCGAATAGCACGCCGTTCAACTTGTGTC 8724
Query 72 G-ACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTG 130
| || | | || || |||| | || |||||||| |||| | |||||| || ||
Sbjct 8723 GCACCTACT-GGTACACAGACTAATACGCGAGGGCTTGGCTTTAAGAAACTATTACTATG 8665
Query 131 AACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCC 190
|||| || || | || | |||||| || || ||| ||||| || |||||
Sbjct 8664 TACCTGACGAATAAAATGTTGTAACATCTTTTCAGTTACCGAGAAATCGGCAATAACGCC 8605
Query 191 GTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGC 250
|||||||| || ||||| || |||||||| || ||||| | || | ||| | || ||
Sbjct 8604 ATCTTTCATTGGGCGAATAGCCGCAATATTTCCAGGTGTTCTTCCCAACATTTGTTTTGC 8545
Query 251 CTCGGTGCCGACGGCAACGACACTTTTCTGATTACC--ATGGGTC----CGAATGGCCAC 304
| | || || ||| | |||||| | || |||| | | || | ||| |||||
Sbjct 8544 CGCTTGTCCTACAGCAGCAACACTTCTTGGAGTACCTGAACGTTCTTGTCTAATTGCCAC 8485
Query 305 AACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGT 364
|| ||||||||||| | || || || | | || ||||| | || || || ||
Sbjct 8484 CACAGATGGCTCATTTAATACAATGCCCTGACCTTTGACATAAATCAAAGTATTAGCGGT 8425
Query 365 GCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT 418
|||| ||||| || ||||| | || |||| ||||| | |||||| | |||
Sbjct 8424 CCCCAAATCAATTGAGAGATCATTAGAGAACACTCCACGAATTTTCTTTAGCAT 8371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1353524753376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |