Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22]
5,559 sequences; 249,185,056 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq1913 73.4 7e-11
>seq1913
Length=212763
Score = 73.4 bits (80), Expect = 7e-11
Identities = 106/147 (72%), Gaps = 2/147 (1%)
Strand=Plus/Minus
Query 82 CCAACCTG-AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTT 140
||||| || || | || | ||| ||||| | | || | ||| || || || | ||||
Sbjct 110434 CCAACATGGAGAATAGCTAAGAACGCTTCCT-GAGGCAATTCTACATTACCTATCTGCTT 110376
Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200
||||||||| ||||| | ||||| |||| | ||||| ||||||||| ||||| ||
Sbjct 110375 CATGCGTTTCTTACCCTCTTTTTGTTTCTGTAATAGCTTTTTCTTACGGCTAACGTCGCC 110316
Query 201 GCCGTAGCATTTGGCCAGTACGTTCTT 227
|| || ||||| || ||||| || ||
Sbjct 110315 ACCATAACATTTTGCTAGTACATTTTT 110289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838353393344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |