Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1913 73.4 7e-11 >seq1913 Length=212763 Score = 73.4 bits (80), Expect = 7e-11 Identities = 106/147 (72%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 82 CCAACCTG-AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTT 140 ||||| || || | || | ||| ||||| | | || | ||| || || || | |||| Sbjct 110434 CCAACATGGAGAATAGCTAAGAACGCTTCCT-GAGGCAATTCTACATTACCTATCTGCTT 110376 Query 141 CATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACC 200 ||||||||| ||||| | ||||| |||| | ||||| ||||||||| ||||| || Sbjct 110375 CATGCGTTTCTTACCCTCTTTTTGTTTCTGTAATAGCTTTTTCTTACGGCTAACGTCGCC 110316 Query 201 GCCGTAGCATTTGGCCAGTACGTTCTT 227 || || ||||| || ||||| || || Sbjct 110315 ACCATAACATTTTGCTAGTACATTTTT 110289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838353393344