Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22]
5,559 sequences; 249,185,056 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq911 232 2e-56
>seq911
Length=74078
Score = 232 bits (256), Expect = 2e-56
Identities = 534/801 (67%), Gaps = 10/801 (1%)
Strand=Plus/Minus
Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGAC 37711
||| |||||||| | | || ||||| | || | || |||| || | ||| |||
Sbjct 47482 ATGCAACAATATCTGGCTTTAATGCAAAAAATTCTTGATGACGGTGTGGCGAAATCAGAT 47423
Query 37712 CGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGAT 37771
|| || || || ||||| | || | || || | || | ||||| || || || |
Sbjct 47422 CGCACTGGGGTTGGCACTTTATCCATTTTTGGTCATCAAATGCGCTTTAATTTGCAGCAA 47363
Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831
|| ||||||||||| || || ||||||| ||| | || || || ||| ||||| | |||
Sbjct 47362 GGCTTTCCGCTCGTCACCACAAAAAAATGTCATCTACGTTCTATTATTCATGAATTACTT 47303
Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGG 37891
||||||||||||||||| || || | ||| | || || ||| || || || |||
Sbjct 47302 TGGTTTTTAAAAGGCGAAACCAATATTGCTTATCTACATGACAATAATGTCACTATCTGG 47243
Query 37892 GATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCG 37951
||||||||||| || ||||||| ||||| || || |||| || |||||||| |
Sbjct 47242 GATGAGTGGGCCGATAAAAACGGTGATCTAGGACCCGTTTATGGTAAACAATGGCGTGCT 47183
Query 37952 TGGAAGGGAGCAGACGGGAA--AACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCA 38009
||| | | ||| || || || ||| ||| || || ||| | ||| | ||||
Sbjct 47182 TGGCAAGCAGCGGATGGTAAGCAAC--GCGATCAAATTAGTGAGGTGATTGAACAAATCA 47125
Query 38010 AACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACG 38069
|| ||||| ||||||| || | | || ||||||||||| | ||| | ||
Sbjct 47124 AAACTAATCCCGATTCACGTCGTTTAATCGTATCAGCTTGGAATGTCGGAGAGCTCGAGC 47065
Query 38070 AGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCGGT 38126
||||| || |||| || | |||| ||| ||||| ||||| || |||||
Sbjct 47064 AGATGGCTTTGGCGCCATGCC---ACGCTTTCTTCCAGTTTTATGTGGCGGACGGCAAAC 47008
Query 38127 TGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCG 38186
|||| ||| | | ||||| || ||| ||||||||| | || ||||| || |
Sbjct 47007 TGTCTTGCCAGCTTTATCAGCGTTCATGCGATGTGTTTTTAGGCCTACCTTTTAATATTG 46948
Query 38187 CGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAAC 38246
| |||||||| |||| |||||| |||| || ||||| || |||| || || ||
Sbjct 46947 CTAGCTACGCTTTGTTAGTACATATGATAGCGCAGCAATGTGATTTGGCGGTAGGCGATT 46888
Query 38247 TCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGC 38306
| ||| || || || || |||| | || || ||| |||||||| | | | |
Sbjct 46887 TTGTTTGGACTGGTGGTGATACCCATCTTTATGCCAACCATATGGAACAAACACATTTAC 46828
Query 38307 AGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTCTA 38366
| ||| || ||| ||| | || || ||| | ||| | || || || || || |
Sbjct 46827 AATTGAGTCGTACGCCACGCGCACTCCCTAAGTTAGTGATTAAGCGCAAACCAAATTCGA 46768
Query 38367 TCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGATTA 38426
| ||||| || | || |||||||| |||| | ||| |||||| |||| || ||||
Sbjct 46767 TTTTTGATTACTGTTTTGAAGACTTTGAGATCGAGGACTATGATCCGTATCCTGCCATTA 46708
Query 38427 AAGCACCGGTGGCGGTTTAAA 38447
| |||||||| ||| ||||||
Sbjct 46707 AGGCACCGGTAGCGATTTAAA 46687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130631376045350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |