Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22] 5,559 sequences; 249,185,056 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1274 122 7e-23 >seq1274 Length=440581 Score = 122 bits (134), Expect = 7e-23 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 61161 TGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTT 61220 ||||||| | | ||| | || | ||| |||||||||| ||||| || || ||||| Sbjct 124663 TGACTGGAATCATTTGACTAGTGATGAGAAACATTTCATATCTCATGTCTTAGCATTCTT 124604 Query 61221 TGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCA 61280 ||| ||||| || || ||||| ||||||||| | | ||||| || ||||| || || Sbjct 124603 TGCGGCTTCTGATGGAATCGTTAATGAGAATCTTGTCGAACGATTTAGTCAGGAAGTACA 124544 Query 61281 AGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGA 61340 ||| | ||||| ||||||||||| || || || | ||||| || ||||| ||||| || Sbjct 124543 AGTAACCGAGGCACGTTGTTTCTATGGTTTTCAAGTCGCCATAGAAAATGTGCACTCAGA 124484 Query 61341 GATGTAC 61347 |||||| Sbjct 124483 AATGTAC 124477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397541064643760