Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20impatiens_20[refseq_20GCF_5F000188095.1_202011-09-22]
5,559 sequences; 249,185,056 total letters
Query= NC_011356.1
Length=54896
Score E
Sequences producing significant alignments: (Bits) Value
seq2372 313 9e-81
>seq2372
Length=84335
Score = 313 bits (346), Expect = 9e-81
Identities = 938/1434 (65%), Gaps = 28/1434 (2%)
Strand=Plus/Plus
Query 53227 TGGTGTTGCTGCTGCTTCAGCAGATGTGCGtttttttAGTCATTGCGTGGTTAATGAGTA 53286
||||| ||| || || ||||||||||| || | ||| || || || | || | ||||
Sbjct 61657 TGGTGCTGCAACTTCTGCAGCAGATGTGTGTCTATTTGGTTATCGCTTATCTATTAAGTA 61716
Query 53287 AAACGCCATTATTCATACCGTTAATGCAGGTCACGGTTCGTCTGCCGCATAAATTTCTCT 53346
|||| || | || || || |||||||| || | | | |||||||||||| || |
Sbjct 61717 AAACCCCCATTTTTATCCCCTTAATGCAAGTAAGTCTATATGCGCCGCATAAATTACTTT 61776
Query 53347 GCTACATCGTCTTTTCCATCTTCTGCATCATGGGCACCTGGTTTGNGTTGCACATTGACG 53406
| || | | ||||| ||||| || || ||||| || | || | | | || ||| | |
Sbjct 61777 GTTATCTTATTTTTTCGATCTTTTGTATTATGGGGACGTATTTAGGGCTACATATTCAAG 61836
Query 53407 ATTCTATTGCCAATACCCGTGCGATAGGCGCGGTAATGGGCGGCTTACTCGGCGGTCCGG 53466
|||||||||| ||||| || || || || || || | || || | | || || ||
Sbjct 61837 ATTCTATTGCTAATACTCGGGCTATCGGTGCCGTCTTAGGTGGAGTTTTTGGGGGACCTT 61896
Query 53467 TCGTCGG-TGGGCTGGTTGGCCTGACCGGCGGGTTACATCGATATTCGATGGGGGGCATG 53525
| ||||| | || | | || | || || || |||| || |||| | | || || ||
Sbjct 61897 TAGTCGGATTAGCCG-TAGGTTTAACGGGAGGAGTACACCGTTATTGGCTAGGTGGTATT 61955
Query 53526 ACCGCGCTAAGTTGCATGATCTCGACCATCGTTGAAGG----ATTGCTCGGCGGCCTGGT 53581
||||| |||||| ||| | ||||| || | || |||||| || || |
Sbjct 61956 ACCGCAGAAAGTTGTATGTTATCGACTATTATCACGGGTCTAATTGCT----GGTGTGAT 62011
Query 53582 ACACAGCATCCTGATCCGTCGCGGGCGCACTGATAAAGTCTTTAACCCCATTACCGCTGG 53641
|| |||||| | ||| ||||| | |||||| | | ||| || | || | |||
Sbjct 62012 CCATGTTATCCTGTTGCGTAAAGGGCGTATTGATAAGTTATATAATCCGTTGACTGTTGG 62071
Query 53642 TGCCGTCACGTTCGTCGCTGAAATG-GTGCAAATGCT---GATCATCCTGGCGATCGCCC 53697
|||| | | | || || | || | ||| | ||| || | | || |
Sbjct 62072 CTTACTCACTCTTG-CTATGGAAGGCGTAGAGATGGTAATGATTATATTAGTGA---CTA 62127
Query 53698 GACCTTATGAAGATGCGGTGCGTCTGGTGAGTAATATTGCTGCGCCAATGATGGTCACCA 53757
|||| | || || || | | ||| |||| | |||||| |||| | || |
Sbjct 62128 AACCTAGCGCTGAAGCATGGCATATTGTGCAATATATCGTTGCGCCTATGACCATTACGA 62187
Query 53758 ATACCGTCGGCGCGGCGCTGTTTATGCGTATATTGCTCGATAAACGCGCGATGTTTGAAA 53817
||| | ||||| || ||||||||| || | || ||| ||||| |||||||| |
Sbjct 62188 ATAGTATTGGCGCAGCTATGTTTATGCAGATCCTTCTTGATCGGCGCGCCATGTTTGAGA 62247
Query 53818 AATACACTTCGGCTTTTTCTGCCACTGCGCTGAAAGTGGCAGCCTCGACGGAAGGCATTT 53877
|||| || | || |||||||||| || | ||| | || || || ||||||||||
Sbjct 62248 AATATACCACCGCATTTTCTGCCAAAGCCTTAAAAATTGCTGCTAGTACCGAAGGCATTT 62307
Query 53878 TGCGCCAGGGGTTTAACGAAGTGAACAGCATGAAAGTGGCTCAGGTGCTGTATCTG--GA 53935
|| | || ||||| | | ||| ||||||||||| ||| | | ||| || ||
Sbjct 62308 TGTTAAACGGTTTTAATCAGCAAACCAGTATGAAAGTGGCACAGAT--TATATTTGATGA 62365
Query 53936 GCTGGATATTGGTGCAGTCGCGATTACCGATCGAGAGAAATTGCTGGCCTTTACCGGAAT 53995
|| | |||||||||| |||||||| ||||| || ||||| | ||||||| ||| |
Sbjct 62366 ACTAAAAGTTGGTGCAGTAGCGATTACTGATCGTGAAAAATTATTAGCCTTTATTGGATT 62425
Query 53996 TGGTGACGACCACCATTTACCCGGCAAACCGATTTCTTC--AACTTATACTTTAAAAGCG 54053
|| | || |||||| | || | ||| || ||||| ||| || | || || |
Sbjct 62426 GGGGAATGAGCACCATGTTGTTGGTACACCTATCTCTTCTCAACATACAATTCAA--GTT 62483
Query 54054 ATTGAAACCGGTGAAGTGGTCTACGCTGATGGCAACGAAGTACCTTATCGTTGCTCTTTG 54113
||| || | |||||| || | |||||| | | ||||| | ||||| |
Sbjct 62484 ATTATCACGAATAAAGTGGAATATGTTGATGGTATTCACACCCCTTACTGCTGCTCAATT 62543
Query 54114 CATCCGCAATGCAAACTGGGGTCGACGCTGGTAATTCCGTTGCGTGGTGAAAATCAGCGG 54173
| | || || || |||||| | || ||||| || |||| |||||||||||
Sbjct 62544 GAGAAAAACTGTTGTCTAGGATCGACGTTAGTGATTCCATTACGTGATGAAAATCAGCAA 62603
Query 54174 GTGATGGGCACCATCAAATTGTATGAAGCCAAAAACCGTTTATTTAGTTCAATCAACCGC 54233
||||| || || || || || ||||| || ||||| ||||||||||||||||| |||
Sbjct 62604 GTGATAGGGACAATTAAGTTATATGAGGCAAAAAATACCTTATTTAGTTCAATCAATCGC 62663
Query 54234 ACGCTGGGCGAGGGGATTGCGCAACTGCTTTCGGCGCAGATCCTCGCCGGGCAATATGAG 54293
|| | || ||||| ||||| || |||||||| || || | || || ||| ||||
Sbjct 62664 ACATTAGGTGAGGGCATTGCCAGTCTTCTTTCGGCACAAATTTTGGCGGGACAAAATGAA 62723
Query 54294 CGGCAAAAAGCGATGCTCACCCAGTCAGAGATCAAACTGCTTCACGCCCAGGTGAACCCC 54353
||| | || | | || ||| || || || ||||| ||||| || || |||||
Sbjct 62724 CGGTATAAGCAGTTACTGTTTCAGAGTGAAATTAAGCTGCTGCACGCGCAAGTTAACCCA 62783
Query 54354 CATTTTTTGTTTAATGCGCTTAACACCATTAAAGCGGTGATCCGTCGCGACAGCGAACAG 54413
|||||| |||||||||| | || || | | |||||||| || || || || | ||
Sbjct 62784 CATTTTCTGTTTAATGCATTAAATACGTTAATGGCGGTGATTCGCCGTGATAGTCAGCAA 62843
Query 54414 GCCAGCCAGCTGGTGCAGTATCTTTCCACTTTTTTCCGCAAAAACTTAAAGCGGCCTTCG 54473
|||||||| | || ||| || | || ||||| || ||||| || ||||| || ||
Sbjct 62844 GCCAGCCATTTAGTTCAGCATTTGTCGACTTTCTTTCGCAAGAATTTAAAACGTCCAGAA 62903
Query 54474 GAGTTTGTTACTCTCGCCGACGAAATTGAACATGTGAATGCTTATCTGCAAATTGAAAAG 54533
||| |||| | || || || ||||||||||| | || ||| | | || ||||||
Sbjct 62904 GAGATTGTGTCACTGAAAGATGAGATTGAACATGTCACCGCCTATTTAGAGATAGAAAAG 62963
Query 54534 GCGCG-CTTCCAGTCGCGGTTGCAGGTCAACATTGCTATTCCGCAAGAATTATCCCAGCA 54592
| || || ||| || || | ||| |||| | | || ||| |||| ||
Sbjct 62964 GTTCGTTTTTCAG-ATCGATTACGGGTTGTTATTGATGTACCCGAAGTGTTATTACATTG 63022
Query 54593 GCAATTGCCCGCGTTTACCCTGCAACCGATAGTGGAAAACGCCATTAAACATGG 54646
| ||||| ||| | |||| || || || || ||||| |||||||||||
Sbjct 63023 TTCTCTACCCGCATTTTCGTTGCAGCCCATTGTCGAGAACGCGATTAAACATGG 63076
Score = 313 bits (346), Expect = 9e-81
Identities = 938/1434 (65%), Gaps = 28/1434 (2%)
Strand=Plus/Plus
Query 53227 TGGTGTTGCTGCTGCTTCAGCAGATGTGCGtttttttAGTCATTGCGTGGTTAATGAGTA 53286
||||| ||| || || ||||||||||| || | ||| || || || | || | ||||
Sbjct 63988 TGGTGCTGCAACTTCTGCAGCAGATGTGTGTCTATTTGGTTATCGCTTATCTATTAAGTA 64047
Query 53287 AAACGCCATTATTCATACCGTTAATGCAGGTCACGGTTCGTCTGCCGCATAAATTTCTCT 53346
|||| || | || || || |||||||| || | | | |||||||||||| || |
Sbjct 64048 AAACCCCCATTTTTATCCCCTTAATGCAAGTAAGTCTATATGCGCCGCATAAATTACTTT 64107
Query 53347 GCTACATCGTCTTTTCCATCTTCTGCATCATGGGCACCTGGTTTGNGTTGCACATTGACG 53406
| || | | ||||| ||||| || || ||||| || | || | | | || ||| | |
Sbjct 64108 GTTATCTTATTTTTTCGATCTTTTGTATTATGGGGACGTATTTAGGGCTACATATTCAAG 64167
Query 53407 ATTCTATTGCCAATACCCGTGCGATAGGCGCGGTAATGGGCGGCTTACTCGGCGGTCCGG 53466
|||||||||| ||||| || || || || || || | || || | | || || ||
Sbjct 64168 ATTCTATTGCTAATACTCGGGCTATCGGTGCCGTCTTAGGTGGAGTTTTTGGGGGACCTT 64227
Query 53467 TCGTCGG-TGGGCTGGTTGGCCTGACCGGCGGGTTACATCGATATTCGATGGGGGGCATG 53525
| ||||| | || | | || | || || || |||| || |||| | | || || ||
Sbjct 64228 TAGTCGGATTAGCCG-TAGGTTTAACGGGAGGAGTACACCGTTATTGGCTAGGTGGTATT 64286
Query 53526 ACCGCGCTAAGTTGCATGATCTCGACCATCGTTGAAGG----ATTGCTCGGCGGCCTGGT 53581
||||| |||||| ||| | ||||| || | || |||||| || || |
Sbjct 64287 ACCGCAGAAAGTTGTATGTTATCGACTATTATCACGGGTCTAATTGCT----GGTGTGAT 64342
Query 53582 ACACAGCATCCTGATCCGTCGCGGGCGCACTGATAAAGTCTTTAACCCCATTACCGCTGG 53641
|| |||||| | ||| ||||| | |||||| | | ||| || | || | |||
Sbjct 64343 CCATGTTATCCTGTTGCGTAAAGGGCGTATTGATAAGTTATATAATCCGTTGACTGTTGG 64402
Query 53642 TGCCGTCACGTTCGTCGCTGAAATG-GTGCAAATGCT---GATCATCCTGGCGATCGCCC 53697
|||| | | | || || | || | ||| | ||| || | | || |
Sbjct 64403 CTTACTCACTCTTG-CTATGGAAGGCGTAGAGATGGTAATGATTATATTAGTGA---CTA 64458
Query 53698 GACCTTATGAAGATGCGGTGCGTCTGGTGAGTAATATTGCTGCGCCAATGATGGTCACCA 53757
|||| | || || || | | ||| |||| | |||||| |||| | || |
Sbjct 64459 AACCTAGCGCTGAAGCATGGCATATTGTGCAATATATCGTTGCGCCTATGACCATTACGA 64518
Query 53758 ATACCGTCGGCGCGGCGCTGTTTATGCGTATATTGCTCGATAAACGCGCGATGTTTGAAA 53817
||| | ||||| || ||||||||| || | || ||| ||||| |||||||| |
Sbjct 64519 ATAGTATTGGCGCAGCTATGTTTATGCAGATCCTTCTTGATCGGCGCGCCATGTTTGAGA 64578
Query 53818 AATACACTTCGGCTTTTTCTGCCACTGCGCTGAAAGTGGCAGCCTCGACGGAAGGCATTT 53877
|||| || | || |||||||||| || | ||| | || || || ||||||||||
Sbjct 64579 AATATACCACCGCATTTTCTGCCAAAGCCTTAAAAATTGCTGCTAGTACCGAAGGCATTT 64638
Query 53878 TGCGCCAGGGGTTTAACGAAGTGAACAGCATGAAAGTGGCTCAGGTGCTGTATCTG--GA 53935
|| | || ||||| | | ||| ||||||||||| ||| | | ||| || ||
Sbjct 64639 TGTTAAACGGTTTTAATCAGCAAACCAGTATGAAAGTGGCACAGAT--TATATTTGATGA 64696
Query 53936 GCTGGATATTGGTGCAGTCGCGATTACCGATCGAGAGAAATTGCTGGCCTTTACCGGAAT 53995
|| | |||||||||| |||||||| ||||| || ||||| | ||||||| ||| |
Sbjct 64697 ACTAAAAGTTGGTGCAGTAGCGATTACTGATCGTGAAAAATTATTAGCCTTTATTGGATT 64756
Query 53996 TGGTGACGACCACCATTTACCCGGCAAACCGATTTCTTC--AACTTATACTTTAAAAGCG 54053
|| | || |||||| | || | ||| || ||||| ||| || | || || |
Sbjct 64757 GGGGAATGAGCACCATGTTGTTGGTACACCTATCTCTTCTCAACATACAATTCAA--GTT 64814
Query 54054 ATTGAAACCGGTGAAGTGGTCTACGCTGATGGCAACGAAGTACCTTATCGTTGCTCTTTG 54113
||| || | |||||| || | |||||| | | ||||| | ||||| |
Sbjct 64815 ATTATCACGAATAAAGTGGAATATGTTGATGGTATTCACACCCCTTACTGCTGCTCAATT 64874
Query 54114 CATCCGCAATGCAAACTGGGGTCGACGCTGGTAATTCCGTTGCGTGGTGAAAATCAGCGG 54173
| | || || || |||||| | || ||||| || |||| |||||||||||
Sbjct 64875 GAGAAAAACTGTTGTCTAGGATCGACGTTAGTGATTCCATTACGTGATGAAAATCAGCAA 64934
Query 54174 GTGATGGGCACCATCAAATTGTATGAAGCCAAAAACCGTTTATTTAGTTCAATCAACCGC 54233
||||| || || || || || ||||| || ||||| ||||||||||||||||| |||
Sbjct 64935 GTGATAGGGACAATTAAGTTATATGAGGCAAAAAATACCTTATTTAGTTCAATCAATCGC 64994
Query 54234 ACGCTGGGCGAGGGGATTGCGCAACTGCTTTCGGCGCAGATCCTCGCCGGGCAATATGAG 54293
|| | || ||||| ||||| || |||||||| || || | || || ||| ||||
Sbjct 64995 ACATTAGGTGAGGGCATTGCCAGTCTTCTTTCGGCACAAATTTTGGCGGGACAAAATGAA 65054
Query 54294 CGGCAAAAAGCGATGCTCACCCAGTCAGAGATCAAACTGCTTCACGCCCAGGTGAACCCC 54353
||| | || | | || ||| || || || ||||| ||||| || || |||||
Sbjct 65055 CGGTATAAGCAGTTACTGTTTCAGAGTGAAATTAAGCTGCTGCACGCGCAAGTTAACCCA 65114
Query 54354 CATTTTTTGTTTAATGCGCTTAACACCATTAAAGCGGTGATCCGTCGCGACAGCGAACAG 54413
|||||| |||||||||| | || || | | |||||||| || || || || | ||
Sbjct 65115 CATTTTCTGTTTAATGCATTAAATACGTTAATGGCGGTGATTCGCCGTGATAGTCAGCAA 65174
Query 54414 GCCAGCCAGCTGGTGCAGTATCTTTCCACTTTTTTCCGCAAAAACTTAAAGCGGCCTTCG 54473
|||||||| | || ||| || | || ||||| || ||||| || ||||| || ||
Sbjct 65175 GCCAGCCATTTAGTTCAGCATTTGTCGACTTTCTTTCGCAAGAATTTAAAACGTCCAGAA 65234
Query 54474 GAGTTTGTTACTCTCGCCGACGAAATTGAACATGTGAATGCTTATCTGCAAATTGAAAAG 54533
||| |||| | || || || ||||||||||| | || ||| | | || ||||||
Sbjct 65235 GAGATTGTGTCACTGAAAGATGAGATTGAACATGTCACCGCCTATTTAGAGATAGAAAAG 65294
Query 54534 GCGCG-CTTCCAGTCGCGGTTGCAGGTCAACATTGCTATTCCGCAAGAATTATCCCAGCA 54592
| || || ||| || || | ||| |||| | | || ||| |||| ||
Sbjct 65295 GTTCGTTTTTCAG-ATCGATTACGGGTTGTTATTGATGTACCCGAAGTGTTATTACATTG 65353
Query 54593 GCAATTGCCCGCGTTTACCCTGCAACCGATAGTGGAAAACGCCATTAAACATGG 54646
| ||||| ||| | |||| || || || || ||||| |||||||||||
Sbjct 65354 TTCTCTACCCGCATTTTCGTTGCAGCCCATTGTCGAGAACGCGATTAAACATGG 65407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175534011686364
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