Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2985 205 1e-50 >seq2985 Length=1020 Score = 205 bits (226), Expect = 1e-50 Identities = 182/222 (82%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64 |||||||||||||||| ||||||||||||| |||||||||||||||| |||||| ||||| Sbjct 1 AAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-CCTCG 58 Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCC 123 || | | || |||||||| | ||||| | ||||| | | |||| | |||||| Sbjct 59 TTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTTACCC 118 Query 124 GGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCC 183 || ||| ||||||| || | || || ||| | | ||||||||||||||||||||||| Sbjct 119 GGGCCTTTCGGCCAGGGAAA---ACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCC 175 Query 184 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||||||||||||||||||||||||||||||||| ||||| || Sbjct 176 AGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751959138435