Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03]
5,609 sequences; 248,654,244 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq2985 205 1e-50
>seq2985
Length=1020
Score = 205 bits (226), Expect = 1e-50
Identities = 182/222 (82%), Gaps = 7/222 (3%)
Strand=Plus/Plus
Query 5 AAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCG 64
|||||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||
Sbjct 1 AAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-CCTCG 58
Query 65 TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCC 123
|| | | || |||||||| | ||||| | ||||| | | |||| | ||||||
Sbjct 59 TTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTTACCC 118
Query 124 GGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCC 183
|| ||| ||||||| || | || || ||| | | |||||||||||||||||||||||
Sbjct 119 GGGCCTTTCGGCCAGGGAAA---ACACGCTGATTCCTTCAGTGTAGCGCGCGTGCGGCCC 175
Query 184 AGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 176 AGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751959138435
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |