Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2985 77.0 2e-12 >seq2985 Length=1020 Score = 77.0 bits (84), Expect = 2e-12 Identities = 87/117 (74%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| || ||| |||| ||||||| ||| ||| | Sbjct 565 GAACCCAAAAGCTTTGGTTTCCCGGAAGCTGCCCGCCGAGTCATCGGAGGAACTTCGGCG 624 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| || | ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 625 GATCGCTGGCTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278385360510