Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2985 122 9e-26 >seq2985 Length=1020 Score = 122 bits (134), Expect = 9e-26 Identities = 140/183 (77%), Gaps = 8/183 (4%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG---CCTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | |||||||| |||| || |||||| | Sbjct 934 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTACCTTCGCCTGAATACTGTGT 875 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 874 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAGCCCCGAGG 817 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| |||| ||| || ||||| | ||||| || | |||||||||||||| Sbjct 816 TAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 757 Query 184 GAT 186 ||| Sbjct 756 GAT 754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511972179360