Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03]
5,609 sequences; 248,654,244 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq2985 226 5e-57
>seq2985
Length=1020
Score = 226 bits (250), Expect = 5e-57
Identities = 206/255 (81%), Gaps = 6/255 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||| || ||||| | ||||| || | ||||| ||||||||||||||||
Sbjct 250 CTTCTTAGAGGAACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 193
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||||||||||||||| || || || |||
Sbjct 192 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGTTTT--- 136
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| |||||| |||| | |||||| | | || ||| ||||||| ||||| | | |||
Sbjct 135 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 76
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 75 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 16
Query 311 ACGTCCCTGCCCTTT 325
|||||||||||||||
Sbjct 15 ACGTCCCTGCCCTTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947146871552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |