Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4 163 9e-38 seq1023 159 1e-36 seq18 152 2e-34 seq763 145 2e-32 seq1081 129 2e-27 seq30 129 2e-27 seq719 123 8e-26 seq747 116 1e-23 seq4694 113 1e-22 seq1060 111 5e-22 seq5426 109 2e-21 seq5374 107 6e-21 seq505 107 6e-21 seq802 105 2e-20 seq2250 102 3e-19 seq174 98.7 3e-18 seq15 86.0 2e-14 seq3721 80.6 9e-13 >seq4 Length=14241696 Score = 163 bits (180), Expect = 9e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 276201 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTTTTTGAATTTCTTCACGTT 276260 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||| ||||||||||||||||||||||||||||||| Sbjct 276261 GACATTCAAAGCACTGGGCAGAAATCACATTGCGTCAACA 276300 >seq1023 Length=159412 Score = 159 bits (176), Expect = 1e-36 Identities = 96/101 (95%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | Sbjct 96964 CCTTAAGAGAGTCATAGTTACTTCCGCCGTTTACCCGCGCTTTTTTGAATTTCTTCACGT 97023 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||| ||||||||||||||||||||||||||||| Sbjct 97024 TGACATTCAGAACACTGGGCAGAAATCACATTGCGTCAACA 97064 >seq18 Length=3466108 Score = 152 bits (168), Expect = 2e-34 Identities = 96/104 (92%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || |||||||||||||||||||||||||||||||||||||| ||| |||||||| |||| Sbjct 3426546 CTTCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCACTTTTTTGAATTTGTTCA 3426487 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | |||||||||| ||||||||||||||||| ||||||||||||| Sbjct 3426486 CGTTGACATTCAAAGCACTGGGCAGAAATCTCATTGCGTCAACA 3426443 Score = 123 bits (136), Expect = 8e-26 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 3410620 GTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCATTAATTAGATGACG 3410679 Query 420 AGGCATTTGGCTA 432 ||||||||||||| Sbjct 3410680 AGGCATTTGGCTA 3410692 Score = 80.6 bits (88), Expect = 9e-13 Identities = 69/86 (80%), Gaps = 7/86 (8%) Strand=Plus/Minus Query 455 CCCGCCGTTTACCCGCGCTTGG-------TTGAATTTCTTCACTTTGACATTCAGAGCAC 507 ||||||||||||| |||||| | || ||||||||| | ||||||||| |||||| Sbjct 948122 CCCGCCGTTTACCGGCGCTTTGGCCTTTTTTCAATTTCTTCGCCTTGACATTCGGAGCAC 948063 Query 508 TGGGCAGAAATCACATTGCGTCAACA 533 |||||||| || |||||| |||||| Sbjct 948062 CGGGCAGAAGTCGCATTGCCTCAACA 948037 >seq763 Length=2388 Score = 145 bits (160), Expect = 2e-32 Identities = 93/100 (93%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| || Sbjct 234 CTTAAGAGAGTCGTAGTTACTCCTGCCGTTTACCCGCGCTTT-TTGAATTTCTTCACGTT 176 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||| ||||||| |||||||||||||||||||||| Sbjct 175 GACATTCAGCGCACTGGACAGAAATCACATTGCGTCAACA 136 >seq1081 Length=6696 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3614 AGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 3555 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 3554 GAGGCATTTGGCTA 3541 >seq30 Length=152210 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 26267 AGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 26326 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 26327 GAGGCATTTGGCTA 26340 >seq719 Length=7292 Score = 123 bits (136), Expect = 8e-26 Identities = 90/105 (86%), Gaps = 6/105 (6%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC------GCTTGGTTGAATTTCTTC 488 ||||||||||||||||||||||||||||||||| || ||||| || ||||||||| Sbjct 636 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCAGCACTTTCGCTTGTTTCAATTTCTTC 695 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || | | ||||||||||||| ||||||||||||||||| | |||| Sbjct 696 ACGTCGTCATTCAGAGCACTCGGCAGAAATCACATTGCCTTAACA 740 >seq747 Length=229336 Score = 116 bits (128), Expect = 1e-23 Identities = 88/102 (86%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC---TTGGTTGAATTT-CTTCACTTT 493 |||||||||||||||||||||||||| |||||||| || || ||||| | | || Sbjct 160734 AGAGAGTCATAGTTACTCCCGCCGTTAACCCGCGCCTTTTTTTTAAATTTTCGTTGAATT 160793 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||| ||||| Sbjct 160794 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCGACATC 160835 >seq4694 Length=1452 Score = 113 bits (124), Expect = 1e-22 Identities = 91/109 (83%), Gaps = 7/109 (6%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG------TTG-AATTT 484 || || |||||||||||||||||||||| ||||||| |||||| | ||| ||||| Sbjct 815 ACATTCAGAGAGTCATAGTTACTCCCGCTGTTTACCAGCGCTTCGGCTTTATTGCAATTT 756 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||| |||||||||||||||||||||||||||||| ||| || ||| Sbjct 755 ATTCACCGTGACATTCAGAGCACTGGGCAGAAATCACAATGCCTCGACA 707 >seq1060 Length=13152 Score = 111 bits (122), Expect = 5e-22 Identities = 70/76 (92%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||| ||| ||||||||| |||||| ||||||||||||||||| ||||||||||||||||| Sbjct 12575 ATATTAGTTAGGGACAGAGGGAATATCGTTAATCCATTCATGTGCGTCACTAATTAGATG 12634 Query 417 ACGAGGCATTTGGCTA 432 | |||||||||||||| Sbjct 12635 ATGAGGCATTTGGCTA 12650 >seq5426 Length=893 Score = 109 bits (120), Expect = 2e-21 Identities = 90/109 (83%), Gaps = 7/109 (6%) Strand=Plus/Plus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT-TGG------TTGAATTT 484 || |||||||||||| ||||||||||||| ||||| ||||| ||| || ||||| Sbjct 42 ACATTAAGAGAGTCACAGTTACTCCCGCCATTTACTAGCGCTGTGGCTTTTTTTCAATTT 101 Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||| | |||||||||| |||||||||||||||| ||||||| || ||| Sbjct 102 CTTCTCGTTGACATTCATAGCACTGGGCAGAAATTACATTGCCTCGACA 150 >seq5374 Length=564 Score = 107 bits (118), Expect = 6e-21 Identities = 90/110 (82%), Gaps = 8/110 (7%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT-TGG-------TTGAATT 483 || |||||||||||| |||||||||||||||||| | ||||| ||| || |||| Sbjct 558 ACATTAAGAGAGTCACAGTTACTCCCGCCGTTTAACAGCGCTGTGGCTTTTTTTTCAATT 499 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||| | |||||||||| |||||||||||||||| ||||||| || ||| Sbjct 498 TCTTAGCGTTGACATTCATAGCACTGGGCAGAAATTACATTGCCTCGACA 449 >seq505 Length=6807 Score = 107 bits (118), Expect = 6e-21 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||| ||||| ||||||||||||||||||||||||||| |||||||| | ||||| Sbjct 2819 AGTAGATAGTGACAGAGGGAATCTCGTTAATCCATTCATGCGCCTCACTAATCACATGAC 2878 Query 419 GAGGCATTTGGCTA 432 ||||||||||||| Sbjct 2879 AAGGCATTTGGCTA 2892 >seq802 Length=174917 Score = 105 bits (116), Expect = 2e-20 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||| ||||||||||||| |||||||| ||||| |||||||||| | |||||||||||||| Sbjct 136715 ATATTAGATAGGGACAGAGGGAATCTGGTTAACCCATTCATGCACATCACTAATTAGATG 136774 Query 417 ACGAGGCATTTGGCTA 432 ||||||||||| |||| Sbjct 136775 ACGAGGCATTTTGCTA 136790 >seq2250 Length=519 Score = 102 bits (112), Expect = 3e-19 Identities = 86/105 (82%), Gaps = 8/105 (8%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT-TGG-------TTGAATTTCTTC 488 ||||| |||| |||||||||||||||||||| | ||| ||| || ||||||||| Sbjct 1 AAGAGGGTCACAGTTACTCCCGCCGTTTACCAGTGCTGTGGCTTTTTTTTCAATTTCTTC 60 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | |||||||||| |||||||||||||||| ||||||| || ||| Sbjct 61 GCGTTGACATTCATAGCACTGGGCAGAAATTACATTGCCTCGACA 105 >seq174 Length=26439 Score = 98.7 bits (108), Expect = 3e-18 Identities = 88/113 (78%), Gaps = 13/113 (12%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG------------- 479 |||||| | ||||||| |||||| ||||||||||||| |||| || Sbjct 18696 CCTTAACAAAGTCATATTTACTCTCGCCGTTTACCCGTGCTTTTGTGTGTTTTTTTTTTC 18637 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 ||||||||||| ||||||||||||||||||| |||||||||||||||| ||| Sbjct 18636 AATTTCTTCACGTTGACATTCAGAGCACTGGATAGAAATCACATTGCGTTAAC 18584 >seq15 Length=11467329 Score = 86.0 bits (94), Expect = 2e-14 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC-ACTTTGACATTCAGAG 504 |||| || ||||| |||||| ||||||| |||||||| | | || |||| |||||||| Sbjct 5948706 ATAGATAGTCCCGTAGTTTACGCGCGCTTTCTTGAATTTTTCCCACGTTGAAATTCAGAG 5948765 Query 505 CACTGGGCAGAAATCACATTGCGT 528 ||||| |||||| ||||||||||| Sbjct 5948766 CACTGAGCAGAAGTCACATTGCGT 5948789 >seq3721 Length=582 Score = 80.6 bits (88), Expect = 9e-13 Identities = 56/63 (89%), Gaps = 3/63 (5%) Strand=Plus/Minus Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 |||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||||| Sbjct 61 CATAGTTACTCCCG---TTTACCCTCGCTTTTTTGAATTTCTTCACGTTGACATTCAGAG 5 Query 505 CAC 507 ||| Sbjct 4 CAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635108281632