Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03]
5,609 sequences; 248,654,244 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq4 163 9e-38
seq1023 159 1e-36
seq18 152 2e-34
seq763 145 2e-32
seq1081 129 2e-27
seq30 129 2e-27
seq719 123 8e-26
seq747 116 1e-23
seq4694 113 1e-22
seq1060 111 5e-22
seq5426 109 2e-21
seq5374 107 6e-21
seq505 107 6e-21
seq802 105 2e-20
seq2250 102 3e-19
seq174 98.7 3e-18
seq15 86.0 2e-14
seq3721 80.6 9e-13
>seq4
Length=14241696
Score = 163 bits (180), Expect = 9e-38
Identities = 96/100 (96%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 276201 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTTTTTGAATTTCTTCACGTT 276260
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||| |||||||||||||||||||||||||||||||
Sbjct 276261 GACATTCAAAGCACTGGGCAGAAATCACATTGCGTCAACA 276300
>seq1023
Length=159412
Score = 159 bits (176), Expect = 1e-36
Identities = 96/101 (95%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |
Sbjct 96964 CCTTAAGAGAGTCATAGTTACTTCCGCCGTTTACCCGCGCTTTTTTGAATTTCTTCACGT 97023
Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||| |||||||||||||||||||||||||||||
Sbjct 97024 TGACATTCAGAACACTGGGCAGAAATCACATTGCGTCAACA 97064
>seq18
Length=3466108
Score = 152 bits (168), Expect = 2e-34
Identities = 96/104 (92%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 3426546 CTTCCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCACTTTTTTGAATTTGTTCA 3426487
Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct 3426486 CGTTGACATTCAAAGCACTGGGCAGAAATCTCATTGCGTCAACA 3426443
Score = 123 bits (136), Expect = 8e-26
Identities = 71/73 (97%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3410620 GTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCATTAATTAGATGACG 3410679
Query 420 AGGCATTTGGCTA 432
|||||||||||||
Sbjct 3410680 AGGCATTTGGCTA 3410692
Score = 80.6 bits (88), Expect = 9e-13
Identities = 69/86 (80%), Gaps = 7/86 (8%)
Strand=Plus/Minus
Query 455 CCCGCCGTTTACCCGCGCTTGG-------TTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||||||||| |||||| | || ||||||||| | ||||||||| ||||||
Sbjct 948122 CCCGCCGTTTACCGGCGCTTTGGCCTTTTTTCAATTTCTTCGCCTTGACATTCGGAGCAC 948063
Query 508 TGGGCAGAAATCACATTGCGTCAACA 533
|||||||| || |||||| ||||||
Sbjct 948062 CGGGCAGAAGTCGCATTGCCTCAACA 948037
>seq763
Length=2388
Score = 145 bits (160), Expect = 2e-32
Identities = 93/100 (93%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
|||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| ||
Sbjct 234 CTTAAGAGAGTCGTAGTTACTCCTGCCGTTTACCCGCGCTTT-TTGAATTTCTTCACGTT 176
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||| ||||||| ||||||||||||||||||||||
Sbjct 175 GACATTCAGCGCACTGGACAGAAATCACATTGCGTCAACA 136
>seq1081
Length=6696
Score = 129 bits (142), Expect = 2e-27
Identities = 73/74 (99%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3614 AGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 3555
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 3554 GAGGCATTTGGCTA 3541
>seq30
Length=152210
Score = 129 bits (142), Expect = 2e-27
Identities = 73/74 (99%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26267 AGTAGATAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 26326
Query 419 GAGGCATTTGGCTA 432
||||||||||||||
Sbjct 26327 GAGGCATTTGGCTA 26340
>seq719
Length=7292
Score = 123 bits (136), Expect = 8e-26
Identities = 90/105 (86%), Gaps = 6/105 (6%)
Strand=Plus/Plus
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC------GCTTGGTTGAATTTCTTC 488
||||||||||||||||||||||||||||||||| || ||||| || |||||||||
Sbjct 636 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCAGCACTTTCGCTTGTTTCAATTTCTTC 695
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|| | | ||||||||||||| ||||||||||||||||| | ||||
Sbjct 696 ACGTCGTCATTCAGAGCACTCGGCAGAAATCACATTGCCTTAACA 740
>seq747
Length=229336
Score = 116 bits (128), Expect = 1e-23
Identities = 88/102 (86%), Gaps = 4/102 (4%)
Strand=Plus/Plus
Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC---TTGGTTGAATTT-CTTCACTTT 493
|||||||||||||||||||||||||| |||||||| || || ||||| | | ||
Sbjct 160734 AGAGAGTCATAGTTACTCCCGCCGTTAACCCGCGCCTTTTTTTTAAATTTTCGTTGAATT 160793
Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||| |||||
Sbjct 160794 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCGACATC 160835
>seq4694
Length=1452
Score = 113 bits (124), Expect = 1e-22
Identities = 91/109 (83%), Gaps = 7/109 (6%)
Strand=Plus/Minus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG------TTG-AATTT 484
|| || |||||||||||||||||||||| ||||||| |||||| | ||| |||||
Sbjct 815 ACATTCAGAGAGTCATAGTTACTCCCGCTGTTTACCAGCGCTTCGGCTTTATTGCAATTT 756
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||| |||||||||||||||||||||||||||||| ||| || |||
Sbjct 755 ATTCACCGTGACATTCAGAGCACTGGGCAGAAATCACAATGCCTCGACA 707
>seq1060
Length=13152
Score = 111 bits (122), Expect = 5e-22
Identities = 70/76 (92%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||| ||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||||
Sbjct 12575 ATATTAGTTAGGGACAGAGGGAATATCGTTAATCCATTCATGTGCGTCACTAATTAGATG 12634
Query 417 ACGAGGCATTTGGCTA 432
| ||||||||||||||
Sbjct 12635 ATGAGGCATTTGGCTA 12650
>seq5426
Length=893
Score = 109 bits (120), Expect = 2e-21
Identities = 90/109 (83%), Gaps = 7/109 (6%)
Strand=Plus/Plus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT-TGG------TTGAATTT 484
|| |||||||||||| ||||||||||||| ||||| ||||| ||| || |||||
Sbjct 42 ACATTAAGAGAGTCACAGTTACTCCCGCCATTTACTAGCGCTGTGGCTTTTTTTCAATTT 101
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||| | |||||||||| |||||||||||||||| ||||||| || |||
Sbjct 102 CTTCTCGTTGACATTCATAGCACTGGGCAGAAATTACATTGCCTCGACA 150
>seq5374
Length=564
Score = 107 bits (118), Expect = 6e-21
Identities = 90/110 (82%), Gaps = 8/110 (7%)
Strand=Plus/Minus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT-TGG-------TTGAATT 483
|| |||||||||||| |||||||||||||||||| | ||||| ||| || ||||
Sbjct 558 ACATTAAGAGAGTCACAGTTACTCCCGCCGTTTAACAGCGCTGTGGCTTTTTTTTCAATT 499
Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||| | |||||||||| |||||||||||||||| ||||||| || |||
Sbjct 498 TCTTAGCGTTGACATTCATAGCACTGGGCAGAAATTACATTGCCTCGACA 449
>seq505
Length=6807
Score = 107 bits (118), Expect = 6e-21
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418
||||||||| ||||| ||||||||||||||||||||||||||| |||||||| | |||||
Sbjct 2819 AGTAGATAGTGACAGAGGGAATCTCGTTAATCCATTCATGCGCCTCACTAATCACATGAC 2878
Query 419 GAGGCATTTGGCTA 432
|||||||||||||
Sbjct 2879 AAGGCATTTGGCTA 2892
>seq802
Length=174917
Score = 105 bits (116), Expect = 2e-20
Identities = 69/76 (91%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||| ||||||||||||| |||||||| ||||| |||||||||| | ||||||||||||||
Sbjct 136715 ATATTAGATAGGGACAGAGGGAATCTGGTTAACCCATTCATGCACATCACTAATTAGATG 136774
Query 417 ACGAGGCATTTGGCTA 432
||||||||||| ||||
Sbjct 136775 ACGAGGCATTTTGCTA 136790
>seq2250
Length=519
Score = 102 bits (112), Expect = 3e-19
Identities = 86/105 (82%), Gaps = 8/105 (8%)
Strand=Plus/Plus
Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT-TGG-------TTGAATTTCTTC 488
||||| |||| |||||||||||||||||||| | ||| ||| || |||||||||
Sbjct 1 AAGAGGGTCACAGTTACTCCCGCCGTTTACCAGTGCTGTGGCTTTTTTTTCAATTTCTTC 60
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
| |||||||||| |||||||||||||||| ||||||| || |||
Sbjct 61 GCGTTGACATTCATAGCACTGGGCAGAAATTACATTGCCTCGACA 105
>seq174
Length=26439
Score = 98.7 bits (108), Expect = 3e-18
Identities = 88/113 (78%), Gaps = 13/113 (12%)
Strand=Plus/Minus
Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG------------- 479
|||||| | ||||||| |||||| ||||||||||||| |||| ||
Sbjct 18696 CCTTAACAAAGTCATATTTACTCTCGCCGTTTACCCGTGCTTTTGTGTGTTTTTTTTTTC 18637
Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532
||||||||||| ||||||||||||||||||| |||||||||||||||| |||
Sbjct 18636 AATTTCTTCACGTTGACATTCAGAGCACTGGATAGAAATCACATTGCGTTAAC 18584
>seq15
Length=11467329
Score = 86.0 bits (94), Expect = 2e-14
Identities = 70/84 (83%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC-ACTTTGACATTCAGAG 504
|||| || ||||| |||||| ||||||| |||||||| | | || |||| ||||||||
Sbjct 5948706 ATAGATAGTCCCGTAGTTTACGCGCGCTTTCTTGAATTTTTCCCACGTTGAAATTCAGAG 5948765
Query 505 CACTGGGCAGAAATCACATTGCGT 528
||||| |||||| |||||||||||
Sbjct 5948766 CACTGAGCAGAAGTCACATTGCGT 5948789
>seq3721
Length=582
Score = 80.6 bits (88), Expect = 9e-13
Identities = 56/63 (89%), Gaps = 3/63 (5%)
Strand=Plus/Minus
Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504
|||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 61 CATAGTTACTCCCG---TTTACCCTCGCTTTTTTGAATTTCTTCACGTTGACATTCAGAG 5
Query 505 CAC 507
|||
Sbjct 4 CAC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635108281632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |