Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombus_20terrestris_20[refseq_20GCF_5F000214255.1_202011-06-03] 5,609 sequences; 248,654,244 total letters Query= NC_033165.1 Length=9141 Score E Sequences producing significant alignments: (Bits) Value seq17 96.9 2e-16 >seq17 Length=3558169 Score = 96.9 bits (106), Expect = 2e-16 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 7781 GCTGACCTTTTTAATTTGGAGTGTAAATTGCTGCGGAACTTTTCCGTACCATATTTTTGC 7840 ||||| || ||||||||||| ||||| | || | ||| || |||||||||||| Sbjct 119161 GCTGAGCTGTTTAATTTGGAAAGTAAACTTATGACACGTTATTCGGTTCCATATTTTTGC 119102 Query 7841 TCCAAATTTTTAATTCAGACCCCGCAGTGGACGTATTTGGTCCCGGACCCTTTGAAGTTC 7900 || |||||| | || || | |||| ||||| || || ||||| | ||||| Sbjct 119101 TCTAAATTTATTATAGTAACAGATGATTGGATATATTTTGTACCAGACCCGGTAAAGTTT 119042 Query 7901 GTGACTAAATTGGGCAGACTGGATATGGCGAACTACAAGCACGTTGAAGAGTATCGCGTG 7960 | || ||||| || ||| |||||| |||| || | ||||| ||||| ||| | || Sbjct 119041 TTAACCAAATTAGGTCGACGAGATATGTCGAATTATGATCACGTGGAAGATTATTGTATG 118982 Query 7961 TCTTGTAATGATACCATGAGTGCGCTGTTTAAC 7993 ||| ||| |||||| ||| | || | |||||| Sbjct 118981 TCTCGTATTGATACGATGTCTCCGTTATTTAAC 118949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 29134161481980