Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1503 297 6e-78 seq112763 251 2e-64 seq218752 152 2e-34 seq51479 152 2e-34 seq666065 118 3e-24 seq446387 91.5 5e-16 >seq1503 Length=1697 Score = 297 bits (328), Expect = 6e-78 Identities = 178/187 (95%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCCTCAC 60 Query 407 TAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 466 |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 61 TAATTAGATGACAAGGAATTTGGGTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 120 Query 467 CCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGC 526 ||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||| | Sbjct 121 CCGCGCTTGCTTGAATTTCTTCACGTTGATATTCAGAGCACTAGGCAGAAATCACATTAC 180 Query 527 GTCAACA 533 ||||||| Sbjct 181 GTCAACA 187 >seq112763 Length=1357 Score = 251 bits (278), Expect = 2e-64 Identities = 142/144 (99%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 607 TTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 666 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 667 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 726 Query 424 ATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||||||||||||||| Sbjct 727 ATTTGGCTACCTTAAGAGAGTCAT 750 >seq218752 Length=365 Score = 152 bits (168), Expect = 2e-34 Identities = 89/92 (97%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| Sbjct 365 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTGTCATT 306 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 |||||||||||||||||||||||||||||||| Sbjct 305 CAGAGCACTGGGCAGAAATCACATTGCGTCAA 274 >seq51479 Length=555 Score = 152 bits (168), Expect = 2e-34 Identities = 132/161 (82%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCA----CTTGCGC-CGAAACGG-CT 238 || ||||||| |||| || | |||||||| ||||| | ||| ||||||| || Sbjct 145 GAGTAAGTAATGAAACAATGAAAGTAGTGGTTTTTCAGCGACGATCGCGCGAAACGATCT 204 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||| ||| | |||| | | |||||||||||||||||||| Sbjct 205 CCCACTTATGCTACACCTCTCATGTCTCCTTACAATGCCAGACTAGAGTCAAGCTCAACA 264 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 ||||||||||||||||||||||| |||||||||||||||| Sbjct 265 GGGTCTTCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTT 305 >seq666065 Length=1164 Score = 118 bits (130), Expect = 3e-24 Identities = 67/68 (99%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1164 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTTCCGC 1105 Query 460 CGTTTACC 467 |||||||| Sbjct 1104 CGTTTACC 1097 >seq446387 Length=280 Score = 91.5 bits (100), Expect = 5e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 226 TCTTTCCCCGCTGATTCTCCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1624196526624