Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20huttoni_20[genbank_20GCA_5F002197625.1_202017-06-19] 672,913 sequences; 450,338,996 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq127819 210 7e-52 seq234166 98.7 3e-18 seq125486 84.2 7e-14 >seq127819 Length=682 Score = 210 bits (232), Expect = 7e-52 Identities = 143/161 (89%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 78 GTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCC 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 310 GTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCC 251 Query 138 GGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCAT 197 ||||||||||||| |||||||||||||||| |||||||||| | | ||||||| Sbjct 250 GGAATCGAACCCTGATTCCCCGTTACCCGTGACAACCATGGTAGTCGCAGAAACTACCAT 191 Query 198 CGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 |||||||||||| |||||| ||||||| || | ||||||| Sbjct 190 CGAAAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGG 150 >seq234166 Length=511 Score = 98.7 bits (108), Expect = 3e-18 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 101 CCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 ||| ||| || |||||||||||| |||||||| |||||||||||| ||| ||||||||| Sbjct 410 CCTAGGACGTAGTAGCCGTTTCTTAGGCTCCCGATCCGGAATCGAATCCTGATTCCCCGT 469 Query 161 TACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAA 202 ||||||| |||||||||| | | || |||||||||| Sbjct 470 TACCCGTGACAACCATGGTAGTCGCAGAACCCACCATCGAAA 511 >seq125486 Length=653 Score = 84.2 bits (92), Expect = 7e-14 Identities = 88/114 (77%), Gaps = 10/114 (9%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||||||||||| || || || ||||| || |||||| ||||| || ||||||||| Sbjct 127 ACTCATTCCAATTACGAGGCCTCATAAGAGTCCCGTATCACTATTT-TTCCCACTACCTC 185 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 |||||| ||||| ||||||| | |||||| || | |||||||||| Sbjct 186 CCCGTGCCGGGAGCGGGTAAT--------CCGCTGCCCTCGTCAGATGTGGTAG 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1500236322048