Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1256 134 6e-29 seq422 127 9e-27 seq419 122 4e-25 seq43324 93.3 2e-16 seq40166 93.3 2e-16 seq1252 93.3 2e-16 >seq1256 Length=9086 Score = 134 bits (148), Expect = 6e-29 Identities = 107/129 (83%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || |||||||||||||||||||||||||||||| ||| |||| ||| | Sbjct 3945 GAGCACAAATGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGGG 4004 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||| Sbjct 4005 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGTA 4064 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 4065 TAGGGGCGA 4073 Score = 129 bits (142), Expect = 2e-27 Identities = 123/157 (78%), Gaps = 3/157 (2%) Strand=Plus/Plus Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85 || ||||||| || |||| |||| ||| || |||||| |||| ||| |||||| | | Sbjct 3078 GACGCTCCTTAGA---GTCGGGTTGCTTGAGAGTGCAGCCCTAAGCGGGTGGTAAACTCC 3134 Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145 ||||| ||||||||| | ||||||||||||| ||||||| |||| ||||| ||| Sbjct 3135 ATCTAAGGCTAAATATGACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGA 3194 Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 |||| |||||| | |||||||| || || |||||||| Sbjct 3195 AAAGAACTTTGAAGAGAGAGTTCAAGAGTACGTGAAA 3231 >seq422 Length=3807715 Score = 127 bits (140), Expect = 9e-27 Identities = 100/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 || |||||||||||||||||||||||||||||| ||| |||| ||| |||||| || Sbjct 1785695 TGCTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGCGGAAACCATG 1785754 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||| ||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 1785755 ATGGAGGATCGTAGCAATTCTGACGTGCAAATCGATCGTCGGAACTGGGTATAGGGGCGA 1785814 >seq419 Length=4206046 Score = 122 bits (134), Expect = 4e-25 Identities = 103/127 (81%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | || ||||||| |||||||||||||||||||||| ||| |||| ||||| Sbjct 3345983 GAGCACAAATGCTGGGACCTGAAAGATGGTGAACTATGCCTGGTCAGGTCGAAGTCAGAG 3346042 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| |||||||||||||||| | || ||| Sbjct 3346043 GAAACCCTGATGGAGGACCGTAGCGATTCTGACGTGCAAATCGATCGTTGTAACTGAGTA 3346102 Query 675 TAGGGGC 681 ||||||| Sbjct 3346103 TAGGGGC 3346109 >seq43324 Length=6031 Score = 93.3 bits (102), Expect = 2e-16 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||| ||||||||| | ||||||||||||| ||||||| |||| ||||| |||| Sbjct 2535 TCTAAGGCTAAATATGACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAA 2594 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 || |||||| | |||||||| ||||| |||||||| Sbjct 2595 AATAACTTTGAAGAGAGAGTTCAAAAGTACGTGAAA 2630 >seq40166 Length=970 Score = 93.3 bits (102), Expect = 2e-16 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||| ||||||||| | ||||||||||||| ||||||| |||| ||||| |||| Sbjct 805 TCTAAGGCTAAATATGACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAA 746 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 ||| |||||| | |||||||| ||||| |||| ||| Sbjct 745 AAGAACTTTGAAGAGAGAGTTCAAAAGTACGTAAAA 710 >seq1252 Length=21353 Score = 93.3 bits (102), Expect = 2e-16 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 87 TCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAA 146 ||||| ||||||||| | ||||||||||||| ||||||| |||| ||||| |||| Sbjct 21001 TCTAAGGCTAAATATGACCGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAA 21060 Query 147 AAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 ||| |||||| | |||||||| ||||| |||| ||| Sbjct 21061 AAGAACTTTGAAGAGAGAGTTCAAAAGTACGTAAAA 21096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079067718650