Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq38352 196 8e-48 seq37546 196 8e-48 seq1359 196 8e-48 seq2277 161 2e-37 seq419 104 4e-20 seq33844 102 1e-19 seq13612 93.3 7e-17 >seq38352 Length=859 Score = 196 bits (216), Expect = 8e-48 Identities = 214/285 (75%), Gaps = 42/285 (15%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 110 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 169 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 | |||| || | |||| |||| | |||||||||||||| Sbjct 170 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGT 227 Query 117 ---------------CA----GCCAC-CA-ACCATAGT--CGATGGGGCTATTTAGCAGG 153 || ||| | || ||| | | ||| | |||||||||||| Sbjct 228 CAGTGAGTTGCGCGACACGAGGCCGCGCACACCTAAATAACGACGC--CTATTTAGCAGG 285 Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213 || ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 286 CTAGAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGC 345 Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| |||||||||||||||| | |||||||| Sbjct 346 CATGCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 390 >seq37546 Length=825 Score = 196 bits (216), Expect = 8e-48 Identities = 214/285 (75%), Gaps = 42/285 (15%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 264 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 323 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 | |||| || | |||| |||| | |||||||||||||| Sbjct 324 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGT 381 Query 117 ---------------CA----GCCAC-CA-ACCATAGT--CGATGGGGCTATTTAGCAGG 153 || ||| | || ||| | | ||| | |||||||||||| Sbjct 382 CAGTGAGTTGCGCGACACGAGGCCGCGCACACCTAAATAACGACGC--CTATTTAGCAGG 439 Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213 || ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 440 CTAGAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGC 499 Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| |||||||||||||||| | |||||||| Sbjct 500 CATGCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 544 >seq1359 Length=9234 Score = 196 bits (216), Expect = 8e-48 Identities = 214/285 (75%), Gaps = 42/285 (15%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 6825 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 6766 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 | |||| || | |||| |||| | |||||||||||||| Sbjct 6765 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGT 6708 Query 117 ---------------CA----GCCAC-CA-ACCATAGT--CGATGGGGCTATTTAGCAGG 153 || ||| | || ||| | | ||| | |||||||||||| Sbjct 6707 CAGTGAGTTGCGCGACACGAGGCCGCGCACACCTAAATAACGACGC--CTATTTAGCAGG 6650 Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213 || ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 6649 CTAGAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGC 6590 Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| |||||||||||||||| | |||||||| Sbjct 6589 CATGCACCACCACCCACCGAATCAAGAAAGAGCTGTTAATCTGTC 6545 >seq2277 Length=316 Score = 161 bits (178), Expect = 2e-37 Identities = 106/116 (91%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||| Sbjct 202 CTATTTAGCAGGCTAGAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCA 261 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 |||||||||||||||||||||||||||| ||||| |||||||||| | ||||||| Sbjct 262 ACTAAGAACGGCCATGCACCACCACCCACCGAATC-AGAAAGAGCTGTTAATCTGT 316 >seq419 Length=4206046 Score = 104 bits (114), Expect = 4e-20 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 256029 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 256088 Query 72 CCTCAAACT 80 ||||| || Sbjct 256089 -CTCAATCT 256096 >seq33844 Length=741 Score = 102 bits (112), Expect = 1e-19 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 680 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 739 Query 72 C 72 | Sbjct 740 C 740 >seq13612 Length=593 Score = 93.3 bits (102), Expect = 7e-17 Identities = 81/97 (84%), Gaps = 4/97 (4%) Strand=Plus/Plus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 78 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||| Sbjct 403 GTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACC--TTATTG-CTCAAT 459 Query 79 CTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | || |||| |||| | |||||||||||||| Sbjct 460 C-TCGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAG 495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796464509103