Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq35500 351 2e-94 seq1488 351 2e-94 seq1256 351 2e-94 seq42209 246 5e-63 seq33548 129 1e-27 seq40299 114 2e-23 >seq35500 Length=769 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 437 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 496 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 497 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 556 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 557 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 616 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 617 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 675 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 676 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 716 >seq1488 Length=5752 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 1458 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 1399 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 1398 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 1339 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1338 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1279 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 1278 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 1220 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 1219 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 1179 >seq1256 Length=9086 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 7406 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 7347 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 7346 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 7287 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7286 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 7227 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 7226 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 7168 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 7167 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 7127 >seq42209 Length=1365 Score = 246 bits (272), Expect = 5e-63 Identities = 165/183 (90%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157 |||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| Sbjct 772 GTGAACAATCCAACGCTTGGCGAATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAA 713 Query 158 GGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 712 GGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 653 Query 218 AACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACT 277 |||||||||||||||||| | || ||| || ||||||||||||||||||| || Sbjct 652 AACTTTTCTGGCACCTCTTG-CTAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCT 594 Query 278 TTC 280 ||| Sbjct 593 TTC 591 >seq33548 Length=737 Score = 129 bits (142), Expect = 1e-27 Identities = 96/110 (87%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 171 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCA 230 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT-ACTTTTCTGGCA 61 Query 231 CCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 ||||| | || ||| || ||||||||||||||||||| ||||| Sbjct 62 CCTCTTG-CTAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 110 >seq40299 Length=981 Score = 114 bits (126), Expect = 2e-23 Identities = 88/103 (85%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| | |||||||||||||||||||||||||||| Sbjct 316 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 375 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAA 102 | |||||||||||||||||||||||||||| || |||||||| Sbjct 376 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAA 418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854028652128