Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq417 84.2 4e-14 seq40299 78.8 2e-12 seq35500 78.8 2e-12 seq1488 78.8 2e-12 seq1256 78.8 2e-12 >seq417 Length=4373199 Score = 84.2 bits (92), Expect = 4e-14 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| ||||||||| | |||||| ||| | || | | | || Sbjct 4257802 GTACGAGAGGAACCGCA-AATTCAGAA-ATTTGGTTCATGCACTCAGCCGAGCGGCCGGT 4257859 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||| | ||||||||||||||| | ||| ||| Sbjct 4257860 GGTGCGAAGCTACCATCCGCGGGATTAGGCCTGAACGCCTCTAAGGCCGAAGCCA 4257914 >seq40299 Length=981 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 318 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 261 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 260 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 206 >seq35500 Length=769 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 439 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 382 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 381 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 327 >seq1488 Length=5752 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 1456 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 1513 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 1514 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 1568 >seq1256 Length=9086 Score = 78.8 bits (86), Expect = 2e-12 Identities = 88/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| ||| | | || | | | || Sbjct 7404 GTACGAGAGGAACCGCAGT-TTCGGAC-ATTTGGTTCATGCACTCGGCCGAGCGGCCGGT 7461 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 | |||||||||||||| || |||||||| ||||||||||||||| | ||| ||| Sbjct 7462 GGTGCGAAGCTACCATCCGCGGGATTATGCCTGAACGCCTCTAAGGCCGAAGCCA 7516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818855077632