Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq38992 405 2e-110 seq37024 185 3e-44 seq1359 161 3e-37 seq1947 149 2e-33 seq746 98.7 3e-18 seq486 84.2 7e-14 seq745 80.6 8e-13 seq760 78.8 3e-12 seq423 77.0 1e-11 seq474 75.2 3e-11 seq473 75.2 3e-11 >seq38992 Length=891 Score = 405 bits (448), Expect = 2e-110 Identities = 410/529 (78%), Gaps = 26/529 (5%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || || | ||||| || ||||| ||||| | ||||||||| Sbjct 2 GTACTCATTCCGATTACGAGGCCTCGTAAGAGTCCCGTATCGTTATTTTTCGTCACTACC 61 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 121 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 122 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGACAACCATGGT 181 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || | | ||||||||||||||||||| |||||| ||||||| || | ||||||| Sbjct 182 AGTCGCAGAAACTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 241 Query 240 TCAAGGCCATGCGAT-TCGTTAAGTTATTATGAATCACC------AAGGA-----GCCCC 287 | | ||||||||| | ||||||| || ||| | || || | | | Sbjct 242 ACTTGACCATGCGATCTGCAAAAGTTATCCAGATTCATCAAAATTAACGACTTCGGACGC 301 Query 288 GAAG------GGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCGAAGTCGGGG 337 || | | || | | |||| |||||||||| ||| ||| || ||| | | Sbjct 302 GAGGCCCTCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGAG 361 Query 338 TTTT--TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 || | | |||||||||||||||||||||||||| |||||||| ||| ||| ||| Sbjct 362 TTCTGATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATC 421 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 || ||| | ||||||| || |||||||||||| || || | || | | |||| || Sbjct 422 TAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCAC 480 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 481 TGAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 529 >seq37024 Length=808 Score = 185 bits (204), Expect = 3e-44 Identities = 257/357 (72%), Gaps = 25/357 (7%) Strand=Plus/Plus Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 |||||||||| | | ||||||||||||||||||| |||||| ||||||| || | Sbjct 7 ACCATGGTAGTCGCAGAAACTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATGCG 66 Query 232 TCGCCGGCTCAAGGCCATGCGATTCGTTAA-GTTATTATGAATCACCAAG------GA-- 282 ||||||| | | ||||||||| | || ||||| || ||| ||| || Sbjct 67 TCGCCGGTACTTGACCATGCGATCTGCAAAAGTTATCCAGATTCATCAAAATTAACGACT 126 Query 283 ---GCCCCGAAG------GGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCGA 329 | | ||| | | || | | |||| |||||||||| ||| ||| || Sbjct 127 TCGGACGCGAGGCCCTCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACT 186 Query 330 AGTCGGGGTTTTTA--GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG 387 ||| | ||| | | |||||||||||||||||||||||||| |||||||| ||| Sbjct 187 GGTCAGAGTTCTGATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGA 246 Query 388 GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT 447 ||| ||| || ||| | ||||||| || |||||||||||| || || | || | | Sbjct 247 GTAAGATCTAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACG 305 Query 448 GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 306 GCTTGCACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 362 >seq1359 Length=9234 Score = 161 bits (178), Expect = 3e-37 Identities = 167/215 (78%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 296 TTGGTTTTTTATCTAATAAATACAC----CCCTTCCGAAGTCGGGGTTTTTA--GCATGT 349 |||||||| |||||||||| ||| ||| || ||| | ||| | | |||||| Sbjct 5486 TTGGTTTTG-ATCTAATAAAAGCACTCATCCCATCACTGGTCAGAGTTCTGATTGCATGT 5428 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409 |||||||||||||||||||| |||||||| ||| ||| ||| || ||| | ||| Sbjct 5427 ATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAAC 5368 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGG 469 |||| || |||||||||||| || || | || | | |||| ||| |||||||||||| Sbjct 5367 TGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCACTGAGACATGCATGG 5309 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||| ||||||||||| Sbjct 5308 CTTAATCTTTGAGACAAGCATATAACTACTGGCAG 5274 >seq1947 Length=220 Score = 149 bits (164), Expect = 2e-33 Identities = 129/159 (81%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405 |||||||||||||||||||||||| |||||||| ||| ||| ||| || | | | Sbjct 218 ATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGACCCA 159 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 ||||||| || |||||||||||| || || | || | | |||| ||| |||||||| Sbjct 158 AAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCACTGAGACATGC 100 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| ||||||||||| Sbjct 99 ATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 61 >seq746 Length=8265254 Score = 98.7 bits (108), Expect = 3e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 91 CTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT 150 ||||||||| |||||||| || ||||||||||||||| ||| |||||||||||| ||||| Sbjct 1868103 CTGCTGCCTCCCTTGGATATGATAGCCGTTTCTCAGGATCCGTCTCCGGAATCGTACCCT 1868044 Query 151 AATTCCCCGTTA 162 ||||||||| || Sbjct 1868043 AATTCCCCGCTA 1868032 >seq486 Length=1287959 Score = 84.2 bits (92), Expect = 7e-14 Identities = 65/78 (83%), Gaps = 6/78 (8%) Strand=Plus/Plus Query 86 CGCGCCTGCTGCCTTCCTTG------GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG 139 |||||| ||||||||||||| ||| || || |||||||||||||||| ||||||| Sbjct 1234595 CGCGCCCGCTGCCTTCCTTGATATAGGATATGATATCCGTTTCTCAGGCTCCTTCTCCGG 1234654 Query 140 AATCGAACCCTAATTCCC 157 |||||||| | ||||||| Sbjct 1234655 AATCGAACTCCAATTCCC 1234672 >seq745 Length=8683647 Score = 80.6 bits (88), Expect = 8e-13 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 91 CTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCT 150 ||||| |||||||||||| || |||||||||||||| |||| ||| ||||||| |||| | Sbjct 7626000 CTGCTACCTTCCTTGGATATGATAGCCGTTTCTCAGACTCCTTCTTCGGAATCTAACCTT 7625941 Query 151 AATT 154 |||| Sbjct 7625940 AATT 7625937 >seq760 Length=5834375 Score = 78.8 bits (86), Expect = 3e-12 Identities = 60/71 (85%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 88 CGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 147 |||||| |||| ||||||||| | | |||||||||| ||||| |||| |||| ||||| Sbjct 2700244 CGCCTGTTGCCGTCCTTGGATATAATTGCCGTTTCTCTAGCTCCTTCTCTGGAACCGAAC 2700303 Query 148 CCTAATTCCCC 158 ||||||||||| Sbjct 2700304 CCTAATTCCCC 2700314 >seq423 Length=3857564 Score = 77.0 bits (84), Expect = 1e-11 Identities = 63/77 (82%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 86 CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGA 145 |||| ||| || |||| |||||| || || |||||||| |||||| ||| |||||||| Sbjct 3468315 CGCGGCTGATGGCTTCTTTGGATATGATAACCGTTTCTTGGGCTCCTTCTATGGAATCGA 3468256 Query 146 ACCCTAATTCCCCGTTA 162 |||||||||| | |||| Sbjct 3468255 ACCCTAATTCTCAGTTA 3468239 >seq474 Length=1585222 Score = 75.2 bits (82), Expect = 3e-11 Identities = 59/71 (83%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 88 CGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 147 |||||| ||||||| |||||| || ||| |||| |||||||| |||||||||||| | Sbjct 911947 CGCCTGATGCCTTCTTTGGATCTGATAGTTGTTTATCAGGCTCTTCCTCCGGAATCGATC 911888 Query 148 CCTAATTCCCC 158 || |||||||| Sbjct 911887 CCAAATTCCCC 911877 >seq473 Length=1567689 Score = 75.2 bits (82), Expect = 3e-11 Identities = 61/73 (84%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 90 CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC 149 |||||||||||||| | ||||| |||| | |||| | |||| || |||||||| |||| Sbjct 357029 CCTGCTGCCTTCCTGGAATGTGATAGCTGCTTCT-ACTCTCCTTCCCCGGAATCAAACCT 357087 Query 150 TAATTCCCCGTTA 162 ||||||||||||| Sbjct 357088 TAATTCCCCGTTA 357100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509743534848