Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq466 244 8e-60 seq483 114 1e-20 >seq466 Length=1632705 Score = 244 bits (270), Expect = 8e-60 Identities = 1144/1800 (64%), Gaps = 45/1800 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || || || || ||||| || |||| || || | | ||| ||||| || || Sbjct 916829 ATCCACAGTAAATTGTATGGCATTGGCTGCCGGTTTTGTTCGCAAATAATACATCCCTGT 916888 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || | || ||| | ||||||||| || || | ||||||| | || ||||| || Sbjct 916889 TTTTAAACCCATTTTCCATGAATAGAAATGAATAGAAGTTAATTTTCCGTAGTTCGGTTC 916948 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || || ||||| || || ||||| ||||| || || |||||||| |||||||| Sbjct 916949 AGCAACGTGTATATTAAAAGATTGACTTTGATCAATAAAAGCTCCACGATCAGCAGCCAT 917008 Query 65257 GTCAAT----GATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCT 65312 | || | | ||| || || ||||| || ||||| || | | | || | Sbjct 917009 TTGTATTGTTGTTTTGACT----GAAATTTCCCAAACTGTCTTATATAAGTCCCTTATTT 917064 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGAC-GTGCAATAATGCGATTACGC 65371 | | || || || || | || | || ||| | ||| | ||||| |||| | Sbjct 917065 CTGTAGGTATACTTTCGATATTTTGTATAGATCCATTATTGTGTA-TAATGAGATTTTTC 917123 Query 65372 ATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACT 65431 || ||| ||| ||| | || | | || ||| || ||| |||| | ||| Sbjct 917124 ATTTCCTCATCCCATAAATCTGCTTCTGTCAAATCACGAAGTAAATGATGATTTACAACT 917183 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 || || || || || | ||||| | ||| || || || |||| ||| ||||| ||| Sbjct 917184 TGAAATTCTCCAGATAAAACACGTCTTTGATAAATATTAGAAGTGAAGGGCTCAAAAGAT 917243 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAG 65551 ||| | || |||| ||| || || || || ||||| ||||| || || ||||| | || Sbjct 917244 TCATTATTTCCTAAAATCTGAGCTGTTGAGGCAGTGGGCATTGGGGCTACCAAAAGAGAA 917303 Query 65552 TTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTT 65609 || || | || | | | ||||||| | || | ||||| ||| | || ||| Sbjct 917304 TTACGAAGACCATGCTTGGCAATGTTTTCTTTTAAAGCAGTCCAGTCCCATAAATCTGTT 917363 Query 65610 TATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAAC 65669 || | | |||||| || | || | | || ||| || || | | Sbjct 917364 G------GATTTTTATT--CCACATTTCGTACTGTAATATGCCTCGACTTGCAGGGCATC 917415 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGG 65729 | | | | || |||||||| | || | || |||| ||| || | ||| ||||| Sbjct 917416 CTTCGTATGTTTCATACACTCCATACTTTTCTGCTAGTTCACAACTTGCCTCTAGTGCTC 917475 Query 65730 CAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACG 65789 || | ||||| || || || || || |||| | || | || || || ||||| | Sbjct 917476 CATAGTAAATAGTTTCAAATATTTGTTGATTTAATTTAATAGCTTCTGGACTTTCGTAAG 917535 Query 65790 GCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGAT 65849 | | || ||| | | ||||| || || ||||||||||| || || || || || | || Sbjct 917536 GTAAACGCATTAAAATAAAAGCATCAGCAAGACCTTGAACACCTATTCCAATAGGTCTAT 917595 Query 65850 GACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGAT 65909 | | | ||| || | | || || || |||||||| ||||| | ||| || || || Sbjct 917596 GTCTAAGATTAGATTTTTTTGCTTCCGGAACAGGGTAATAATTTACATCAATGATTTTAT 917655 Query 65910 TCAAATTGCGTGTCACCACATGCACGATACGTCGC--AATTGTTCGAAATCAAAATGTTT 65967 ||||||| ||| | | | | | || || |||| | || | | | ||||| Sbjct 917656 TCAAATTTTCTGTTAT-AGTTTTAGTA-ACTTCTTTTAATTTCTTAAAGTTATA-TGTTT 917712 Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027 | ||| | |||||| | || || | ||| || | |||||| Sbjct 917713 TGTT--ATCATCA------------ACAAACATATTTAGCGCTATAGAGGCTAAGTTGCA 917758 Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087 || || | || ||| || ||||| || || ||||| |||||||| ||||| || Sbjct 917759 TACTGCCACTTCATCATCAGATGTATATTCAACTATTTCAGTGCACAGGTTACTACATTT 917818 Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147 |||||| || ||||| | |||||||| || | ||| |||| ||| || | | |||||| Sbjct 917819 TATGGTACCTAAATTTTTCTGATTACTTTTTCTATTACATGAATCTTTAAATAACATGTA 917878 Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207 ||||| || ||||| ||||| | || || || || | ||||||| | ||||| | || Sbjct 917879 TGGAGTACCAGTCTCTACTTGAGCTTCTATTATTGCTTTCCAAAGAACTTGTGCCCTTAC 917938 Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 ||| ||| || ||| || ||| || | | ||| || || || Sbjct 917939 TTGTTTTACAAATCTATTTTCTTTTTCATATGTTTCATATAAGGATTCAAATTCTTTTCC 917998 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||| || | | | ||| || | || |||||||| || | ||| | ||||| | Sbjct 917999 CCAACAGTCAGCTAACCCTGGGCAATCATGAGGACACATAAGGGTCCATACGCCATCATT 918058 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| || | ||| || |||||||||||||| | || || || || || | || || Sbjct 918059 TTCAACTCTTTTCATGAAAAGATCAGGTATCCACAATGCATAAAAAAGTTCCCTGGCACG 918118 Query 66388 TTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | || || | || ||| ||||| || || | ||| ||||| || |||||||||| Sbjct 918119 TACTTCTTCTTTTCCAGTG-TTTTTCTTTAAATCTAAGAATTCAAATATATCGGCATGCC 918177 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 | ||||||| |||| || || | || || || || ||||| || || || | Sbjct 918178 ACGGTTCCAAATAGACTGCAAAAGCTCCAGGGCGCTTATTACCTCCTTGATCAACATATC 918237 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 ||| ||| ||| | || || ||||| ||||| || || || ||| ||||| || | Sbjct 918238 TAGCTGTATTATTGTAAACTCGTAACATTGGTACAAGACCATTTGATACACCATTTGTTC 918297 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 | | || | ||| |||| |||| ||| |||| | |||||| ||||| || | Sbjct 918298 CTGCTATATAAGTACCTTTAGCCCTTATACAGTGGACATGGACACCAATTCCACCTGCAG 918357 Query 66627 TCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 || || || |||||| | | || | | || || |||||| |||| | | Sbjct 918358 ATTTAGATATCAAAGCACACTGCTTTAAGGTATCGTAAATTCCTTCAATGCTGTCATCTT 918417 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || | || || | ||||| |||||||| || || || || ||||| | || Sbjct 918418 TCATTGCCACTAGAAAACATGATGATAGTTGGGGGCGTGGAGTTGCAGCTGAGAATAAGG 918477 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA-TTGTACGTCTCGATGACAGCA 66805 | || | || || || || || | ||| | |||| ||||| || | ||| | ||| Sbjct 918478 TTGGGCTGGCATGAGTGAAATATTTCTCAGA-AAGTAAGTTGTATGTATTTATGGCTGCA 918536 Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTC 66864 ||||| | ||| |||||||| || | || ||| ||||||||| | | |||||| ||||| Sbjct 918537 TCAATATCTTCACCATGAATTCCAATTGACAC-TCGCATCAGCATATGTTGAGGTCGTTC 918595 >seq483 Length=1310704 Score = 114 bits (126), Expect = 1e-20 Identities = 137/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 61191 ACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAA 61250 ||||||||| || ||||| | || |||||||| ||||| || || || || ||||| || Sbjct 166195 ACATTTCATCAAGCATGTCCTTGCTTTCTTTGCGGCTTCAGATGGCATTGTAAATGAAAA 166254 Query 61251 TTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTT 61310 || | || | || | || || || ||||| | ||||| | |||||||| ||||| Sbjct 166255 CTTGGTTGAGAGATTTTCACAAGAAGTTCAAGTCACTGAGGCAAGATGTTTCTATGGCTT 166314 Query 61311 CCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||||| |||||||| ||||| || || || ||||| | || || ||||| ||||| Sbjct 166315 CCAGATAGCCATGGAAAATGTTCATTCTGAAATGTATTCCCTGCTTATAGATACCTACAT 166374 Query 61371 CAGGGA 61376 ||| || Sbjct 166375 CAGAGA 166380 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 61024 AATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAG 61083 || ||||| || ||| ||||| || || || || || | ||||| || | || Sbjct 165861 AAGGAACCTCTGCTGCGGGAGAACCCGCGGCGCTTTGTCATCTTCCCTATTCAATACCCC 165920 Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 ||||| |||| |||||||| || || |||||||| || ||||| || ||||| |||||| Sbjct 165921 GATATATGGCAAATGTACAAGAAAGCTGAAGCTTCGTTTTGGACCGTCGAGGAAGTCGAT 165980 Query 61144 TTGTCCAA 61151 |||||||| Sbjct 165981 TTGTCCAA 165988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397357406118320