Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bombyx_20mori_20[refseq_20GCF_5F000151625.1_202008-04-28] 43,463 sequences; 481,819,406 total letters Query= NC_028482.1 Length=11877 Score E Sequences producing significant alignments: (Bits) Value seq435 89.7 4e-14 >seq435 Length=2821953 Score = 89.7 bits (98), Expect = 4e-14 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 1563 GACTCTGGATGAGTTGATGAACTATCTGGTAATCAGGATAGTGCCGAAGGAAAAAGAGCA 1622 |||||| |||| | || | ||| ||||||||| || || || || || || | Sbjct 26089 GACTCTTGATGGACTTATCGAATATTAGGTAATCAGAGCTGTACCAAAAGAGAAGGAACT 26148 Query 1623 CAAAATAGATTTCAGAGGATTCGGATGCAAGACGTACGAGGATAGGCTGCGATGTCTAGC 1682 ||||||||| |||| ||||| || |||||||||||||| ||| | || || | || Sbjct 26149 CAAAATAGACCCCAGATTCTTCGGGTGTAAGACGTACGAGGAAAGGTTCCGTAGTTTGGC 26208 Query 1683 CCAGGAGAAGGCTGTCATGCAATATTTAGATTTATATAGTGATGAGCAAGCCATGACCCT 1742 |||||||| || ||| ||| | || | || ||||||||||||||||||| | Sbjct 26209 TCAGGAGAAAAATGCAATGAAATTCCTTGAATATTACTGTGATGAGCAAGCCATGACATT 26268 Query 1743 GTCGGAGCT 1751 ||| || || Sbjct 26269 GTCCGAACT 26277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37872672766212