Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value SEQ39308 387 4e-105 seq1798 75.2 3e-11 >SEQ39308 Length=694 Score = 387 bits (428), Expect = 4e-105 Identities = 420/557 (75%), Gaps = 59/557 (11%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 555 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 496 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 495 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 436 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 435 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 376 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 375 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 316 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA------------------- 279 || | |||||| | | ||||| || ||||||| Sbjct 315 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 256 Query 280 ------GGAGCCCCGAAGG--------GCGTTGGTTTTTTATCTAATAAATACA------ 319 |||||| || || | ||||| |||| |||| |||||| || Sbjct 255 CCGGCCGGAGCCGGGAGGGAACTGACCGGGTTGG-TTTTGATCTGATAAATGCACGCATC 197 Query 320 CCCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGT 372 |||| ||||| ||||| | |||||||||||||||||||||||||| || Sbjct 196 CCCCCCGCGAAG--GGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGT 139 Query 373 TATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTC 427 |||||| |||| | || | | | |||| ||| ||||||||||||||||||||||| Sbjct 138 TATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTC 79 Query 428 GCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 |||||||||||||| | | ||||||||||||||||||||||||||||||||||| Sbjct 78 GCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAG 19 Query 488 CATATGACTACTGGCAG 504 |||||| |||||||||| Sbjct 18 CATATG-CTACTGGCAG 3 >seq1798 Length=508928 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/100 (78%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 ||| || ||| | ||||||| || |||||||||||| || || | || | | || | Sbjct 74473 ATCTAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCATG 74415 Query 453 T-ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 | ||| |||||||||||||| ||||||||||||||| ||| Sbjct 74414 TCACTGAGACATGCATGGCTAAATCTTTGAGACAAGTATA 74375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509790417664