Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calephelis_20nemesis_20[genbank_20GCA_5F002245505.1_202017-08-10] 40,359 sequences; 808,524,533 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq409 113 4e-20 >seq409 Length=488447 Score = 113 bits (124), Expect = 4e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 61434 GAAAGCGGATTGGGC-CTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGAT 61492 ||| ||||| ||||| || |||| |||| | || | ||| || || ||||| ||||| Sbjct 75361 GAAGGCGGACTGGGCACTACAAT-GGATTGCAAGCAAAACTGCCACGTTTGGAGAACGTA 75303 Query 61493 TGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTT 61552 | | |||||||| | || |||||| | |||||| || ||||| | ||||||| Sbjct 75302 TTATAGCATTTGCAGCTGTAGAGGGTATTTTTTTCTCAGGCAGTTTTGCTTCTATCTTTT 75243 Query 61553 GGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCG 61612 |||| ||||| |||||||| ||||| || |||| ||||| |||||| | |||||| | | Sbjct 75242 GGTTAAAGAAGCGTGGACTCATGCCTGGCTTGACTTTCAGTAATGAGCTTATATCAAGAG 75183 Query 61613 ACGAGG 61618 | |||| Sbjct 75182 ATGAGG 75177 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||||||| || || || |||||| | || || | ||||| ||| ||||| ||| Sbjct 76629 GAACCCCTACTGAGGGATAACCCTCGTAGATTTGTTATATTCCCTATCCAGTATCCAGAT 76570 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| ||||||||||| || ||||||||||| ||||| || || || || ||||| Sbjct 76569 ATTTGGGAAATGTACAAAAAAGCCGAAGCTTCCTTTTGGACTGTTGAAGAAGTGGATTTA 76510 Query 61147 TCCAA 61151 || || Sbjct 76509 TCAAA 76505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397372446115760